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NM_001145346.2(RBMXL3):c.2635G>A (p.Asp879Asn) AND not specified

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Sep 12, 2023
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004064278.1

Allele description [Variation Report for NM_001145346.2(RBMXL3):c.2635G>A (p.Asp879Asn)]

NM_001145346.2(RBMXL3):c.2635G>A (p.Asp879Asn)

Genes:
RBMXL3:RBMX like 3 [Gene - HGNC]
LRCH2:leucine rich repeats and calponin homology domain containing 2 [Gene - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xq23
Genomic location:
Preferred name:
NM_001145346.2(RBMXL3):c.2635G>A (p.Asp879Asn)
Other names:
p.D879N
HGVS:
  • NC_000023.11:g.115192076G>A
  • NG_021299.2:g.46997C>T
  • NM_001145346.2:c.2635G>AMANE SELECT
  • NM_001243963.2:c.350-3706C>T
  • NM_020871.4:c.350-3706C>TMANE SELECT
  • NP_001138818.1:p.Asp879Asn
  • NC_000023.10:g.114426639G>A
  • NM_001145346.1:c.2635G>A
Protein change:
D879N
Molecular consequence:
  • NM_001243963.2:c.350-3706C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_020871.4:c.350-3706C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001145346.2:c.2635G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004077463Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)
Uncertain significance
(Sep 12, 2023)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV004077463.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The c.2635G>A (p.D879N) alteration is located in exon 1 (coding exon 1) of the RBMXL3 gene. This alteration results from a G to A substitution at nucleotide position 2635, causing the aspartic acid (D) at amino acid position 879 to be replaced by an asparagine (N). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 3, 2024