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NM_000218.3(KCNQ1):c.1514+20395GAGT[7] AND not provided

Germline classification:
Benign (1 submission)
Last evaluated:
Jan 1, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002511690.9

Allele description [Variation Report for NM_000218.3(KCNQ1):c.1514+20395GAGT[7]]

NM_000218.3(KCNQ1):c.1514+20395GAGT[7]

Genes:
KCNQ1OT1:KCNQ1 opposite strand/antisense transcript 1 [Gene - OMIM - HGNC]
KCNQ1:potassium voltage-gated channel subfamily Q member 1 [Gene - OMIM - HGNC]
Variant type:
Microsatellite
Cytogenetic location:
11p15.5
Genomic location:
Preferred name:
NM_000218.3(KCNQ1):c.1514+20395GAGT[7]
HGVS:
  • NC_000011.10:g.2682476GAGT[7]
  • NG_008935.1:g.242486GAGT[7]
  • NG_016178.2:g.22492ACTC[7]
  • NM_000218.3:c.1514+20395GAGT[7]MANE SELECT
  • NM_001406836.1:c.1418+20395GAGT[7]
  • NM_001406837.1:c.1244+20395GAGT[7]
  • NM_001406838.1:c.974+20395GAGT[7]
  • NM_181798.2:c.1133+20395GAGT[7]
  • LRG_1052t1:n.17492ACTC[7]
  • LRG_1052:g.22492ACTC[7]
  • LRG_287:g.242486GAGT[7]
  • NC_000011.9:g.2703706GAGT[7]
  • NR_002728.3:n.17492ACTC[7]
  • NR_002728.4:n.17488_17491ACTC[7]
Molecular consequence:
  • NM_000218.3:c.1514+20395GAGT[7] - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406836.1:c.1418+20395GAGT[7] - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406837.1:c.1244+20395GAGT[7] - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406838.1:c.974+20395GAGT[7] - intron variant - [Sequence Ontology: SO:0001627]
  • NM_181798.2:c.1133+20395GAGT[7] - intron variant - [Sequence Ontology: SO:0001627]
Observations:
11

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002821603CeGaT Center for Human Genetics Tuebingen
criteria provided, single submitter

(CeGaT Center For Human Genetics Tuebingen Variant Classification Criteria Version 2)
Benign
(Jan 1, 2024)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes11not providednot providednot providednot providedclinical testing

Details of each submission

From CeGaT Center for Human Genetics Tuebingen, SCV002821603.8

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided11not providednot providedclinical testingnot provided

Description

KCNQ1OT1: BS1, BS2

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided11not providednot providednot provided

Last Updated: Apr 15, 2024