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NM_001367624.2(ZNF469):c.2370G>A (p.Leu790=) AND Cardiovascular phenotype

Germline classification:
Likely benign (1 submission)
Last evaluated:
Mar 1, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002450878.9

Allele description [Variation Report for NM_001367624.2(ZNF469):c.2370G>A (p.Leu790=)]

NM_001367624.2(ZNF469):c.2370G>A (p.Leu790=)

Gene:
ZNF469:zinc finger protein 469 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
16q24.2
Genomic location:
Preferred name:
NM_001367624.2(ZNF469):c.2370G>A (p.Leu790=)
Other names:
NM_001127464.1:c.2370G>A; NM_001127464.2:c.2370G>A
HGVS:
  • NC_000016.10:g.88429840G>A
  • NG_012236.2:g.7370G>A
  • NM_001367624.2:c.2370G>AMANE SELECT
  • NP_001354553.1:p.Leu790=
  • NC_000016.9:g.88496248G>A
Links:
dbSNP: rs147859144
NCBI 1000 Genomes Browser:
rs147859144
Molecular consequence:
  • NM_001367624.2:c.2370G>A - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Cardiovascular phenotype
Identifiers:
MedGen: CN230736

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Assertion and evidence details

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Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002735866Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)		Likely benign
(Mar 1, 2019) 		germlineclinical testing

Citation Link

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Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV002735866.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 8, 2024