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NM_001371596.2(MFSD8):c.235G>T (p.Val79Phe) AND Inborn genetic diseases

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Apr 11, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002318662.9

Allele description [Variation Report for NM_001371596.2(MFSD8):c.235G>T (p.Val79Phe)]

NM_001371596.2(MFSD8):c.235G>T (p.Val79Phe)

Gene:
MFSD8:major facilitator superfamily domain containing 8 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
4q28.2
Genomic location:
Preferred name:
NM_001371596.2(MFSD8):c.235G>T (p.Val79Phe)
HGVS:
  • NC_000004.12:g.127943956C>A
  • NG_008657.1:g.27029G>T
  • NM_001363520.3:c.235G>T
  • NM_001363521.3:c.235G>T
  • NM_001371590.2:c.100G>T
  • NM_001371591.2:c.235G>T
  • NM_001371592.2:c.235G>T
  • NM_001371593.2:c.235G>T
  • NM_001371594.2:c.235G>T
  • NM_001371595.1:c.100G>T
  • NM_001371596.2:c.235G>TMANE SELECT
  • NM_001410765.1:c.100G>T
  • NM_001410766.1:c.235G>T
  • NM_152778.4:c.235G>T
  • NP_001350449.1:p.Val79Phe
  • NP_001350449.1:p.Val79Phe
  • NP_001350450.1:p.Val79Phe
  • NP_001350450.1:p.Val79Phe
  • NP_001358519.1:p.Val34Phe
  • NP_001358519.1:p.Val34Phe
  • NP_001358520.1:p.Val79Phe
  • NP_001358520.1:p.Val79Phe
  • NP_001358521.1:p.Val79Phe
  • NP_001358521.1:p.Val79Phe
  • NP_001358522.1:p.Val79Phe
  • NP_001358522.1:p.Val79Phe
  • NP_001358523.1:p.Val79Phe
  • NP_001358523.1:p.Val79Phe
  • NP_001358524.1:p.Val34Phe
  • NP_001358525.1:p.Val79Phe
  • NP_001397694.1:p.Val34Phe
  • NP_001397695.1:p.Val79Phe
  • NP_689991.1:p.Val79Phe
  • LRG_833t1:c.235G>T
  • LRG_833t2:c.235G>T
  • LRG_833:g.27029G>T
  • LRG_833p1:p.Val79Phe
  • LRG_833p2:p.Val79Phe
  • NC_000004.11:g.128865111C>A
  • NM_001363520.2:c.235G>T
  • NM_001363521.2:c.235G>T
  • NM_001371590.1:c.100G>T
  • NM_001371591.1:c.235G>T
  • NM_001371592.1:c.235G>T
  • NM_001371593.1:c.235G>T
  • NM_001371594.1:c.235G>T
  • NM_152778.2:c.235G>T
Protein change:
V34F
Links:
dbSNP: rs749244700
NCBI 1000 Genomes Browser:
rs749244700
Molecular consequence:
  • NM_001363520.3:c.235G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001363521.3:c.235G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001371590.2:c.100G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001371591.2:c.235G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001371592.2:c.235G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001371593.2:c.235G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001371594.2:c.235G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001371595.1:c.100G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001371596.2:c.235G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001410765.1:c.100G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001410766.1:c.235G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_152778.4:c.235G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000849924Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)
Uncertain significance
(Apr 11, 2016)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV000849924.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The p.V79F variant (also known as c.235G>T), located in coding exon 4 of the MFSD8 gene, results from a G to T substitution at nucleotide position 235. The valine at codon 79 is replaced by phenylalanine, an amino acid with highly similar properties. This variant was not reported in population based cohorts in the following databases: Database of Single Nucleotide Polymorphisms (dbSNP), NHLBI Exome Sequencing Project (ESP), and 1000 Genomes Project. In the ESP, this variant was not observed in 6503 samples (13006 alleles) with coverage at this position. This amino acid position is not well conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this variant remains unclear.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 10, 2024