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NM_152263.4(TPM3):c.210G>A (p.Glu70=) AND multiple conditions

Germline classification:
Likely benign (1 submission)
Last evaluated:
Jun 13, 2023
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002181804.6

Allele description [Variation Report for NM_152263.4(TPM3):c.210G>A (p.Glu70=)]

NM_152263.4(TPM3):c.210G>A (p.Glu70=)

Gene:
TPM3:tropomyosin 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q21.3
Genomic location:
Preferred name:
NM_152263.4(TPM3):c.210G>A (p.Glu70=)
HGVS:
  • NC_000001.11:g.154191219C>T
  • NG_008621.1:g.5915G>A
  • NM_001364679.2:c.210G>A
  • NM_001364680.2:c.210G>A
  • NM_001364681.2:c.210G>A
  • NM_001364682.1:c.210G>A
  • NM_152263.4:c.210G>AMANE SELECT
  • NP_001351608.1:p.Glu70=
  • NP_001351609.1:p.Glu70=
  • NP_001351610.1:p.Glu70=
  • NP_001351611.1:p.Glu70=
  • NP_689476.2:p.Glu70=
  • LRG_681t2:c.210G>A
  • LRG_681:g.5915G>A
  • LRG_681p2:p.Glu70=
  • NC_000001.10:g.154163695C>T
  • NR_103460.2:n.397G>A
Links:
dbSNP: rs767668245
NCBI 1000 Genomes Browser:
rs767668245
Molecular consequence:
  • NR_103460.2:n.397G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NM_001364679.2:c.210G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001364680.2:c.210G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001364681.2:c.210G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001364682.1:c.210G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_152263.4:c.210G>A - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Congenital myopathy 4B, autosomal recessive
Synonyms:
Nemaline myopathy caused by mutation in the tropomyosin 3 gene; Nemaline myopathy 1, autosomal dominant or recessive
Identifiers:
MONDO: MONDO:0012239; MedGen: C5829889; Orphanet: 171433; Orphanet: 171439; Orphanet: 171881; OMIM: 609284
Name:
Congenital myopathy with fiber type disproportion
Synonyms:
Congenital fiber-type disproportion myopathy; Congenital Fiber-Type Disproportion
Identifiers:
MONDO: MONDO:0009711; MedGen: C0546264; Orphanet: 2020

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002488895Labcorp Genetics (formerly Invitae), Labcorp
criteria provided, single submitter

(Invitae Variant Classification Sherloc (09022015))		Likely benign
(Jun 13, 2023) 		germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Sherloc: a comprehensive refinement of the ACMG-AMP variant classification criteria.

Nykamp K, Anderson M, Powers M, Garcia J, Herrera B, Ho YY, Kobayashi Y, Patil N, Thusberg J, Westbrook M; Invitae Clinical Genomics Group, Topper S.

Genet Med. 2017 Oct;19(10):1105-1117. doi: 10.1038/gim.2017.37. Epub 2017 May 11. Erratum in: Genet Med. 2020 Jan;22(1):240. doi: 10.1038/s41436-019-0624-9.

PubMed [citation]
PMID:
28492532
PMCID:
PMC5632818

Details of each submission

From Labcorp Genetics (formerly Invitae), Labcorp, SCV002488895.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024