ClinVar

GRCh37/hg19 6q15-22.2(chr6:92054891-118329651)

Genes:

• NT5DC1:5'-nucleotidase domain containing 1 [Gene - HGNC]
• AFG1L:AFG1 like ATPase [Gene - OMIM - HGNC]
• BEND3:BEN domain containing 3 [Gene - OMIM - HGNC]
• CD164:CD164 molecule [Gene - OMIM - HGNC]
• DDO:D-aspartate oxidase [Gene - OMIM - HGNC]
• EPHA7:EPH receptor A7 [Gene - OMIM - HGNC]
• FBXL4:F-box and leucine rich repeat protein 4 [Gene - OMIM - HGNC]
• FIG4:FIG4 phosphoinositide 5-phosphatase [Gene - OMIM - HGNC]
• FYN:FYN proto-oncogene, Src family tyrosine kinase [Gene - OMIM - HGNC]
• GPR63:G protein-coupled receptor 63 [Gene - OMIM - HGNC]
• GPR6:G protein-coupled receptor 6 [Gene - OMIM - HGNC]
• GPRC6A:G protein-coupled receptor class C group 6 member A [Gene - OMIM - HGNC]
• HACE1:HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Gene - OMIM - HGNC]
• MMS22L:MMS22 like, DNA repair protein [Gene - OMIM - HGNC]
• NDUFAF4:NADH:ubiquinone oxidoreductase complex assembly factor 4 [Gene - OMIM - HGNC]
• NUS1:NUS1 dehydrodolichyl diphosphate synthase subunit [Gene - OMIM - HGNC]
• PNISR:PNN interacting serine and arginine rich protein [Gene - OMIM - HGNC]
• POU3F2:POU class 3 homeobox 2 [Gene - OMIM - HGNC]
• PRDM13:PR/SET domain 13 [Gene - OMIM - HGNC]
• PRDM1:PR/SET domain 1 [Gene - OMIM - HGNC]
• REV3L:REV3 like, DNA directed polymerase zeta catalytic subunit [Gene - OMIM - HGNC]
• ROS1:ROS proto-oncogene 1, receptor tyrosine kinase [Gene - OMIM - HGNC]
• RWDD1:RWD domain containing 1 [Gene - HGNC]
• SEC63:SEC63 homolog, protein translocation regulator [Gene - OMIM - HGNC]
• SIM1:SIM bHLH transcription factor 1 [Gene - OMIM - HGNC]
• SCML4:Scm polycomb group protein like 4 [Gene - HGNC]
• TRAF3IP2:TRAF3 interacting protein 2 [Gene - OMIM - HGNC]
• TRAF3IP2-AS1:TRAF3IP2 antisense RNA 1 [Gene - HGNC]
• TSPYL1:TSPY like 1 [Gene - OMIM - HGNC]
• TSPYL4:TSPY like 4 [Gene - OMIM - HGNC]
• UFL1:UFM1 specific ligase 1 [Gene - OMIM - HGNC]
• WASF1:WASP family member 1 [Gene - OMIM - HGNC]
• ASCC3:activating signal cointegrator 1 complex subunit 3 [Gene - OMIM - HGNC]
• AMD1:adenosylmethionine decarboxylase 1 [Gene - OMIM - HGNC]
• AK9:adenylate kinase 9 [Gene - OMIM - HGNC]
• ARMC2:armadillo repeat containing 2 [Gene - OMIM - HGNC]
• ATG5:autophagy related 5 [Gene - OMIM - HGNC]
• BVES:blood vessel epicardial substance [Gene - OMIM - HGNC]
• CALHM4:calcium homeostasis modulator family member 4 [Gene - HGNC]
• CALHM5:calcium homeostasis modulator family member 5 [Gene - HGNC]
• CALHM6:calcium homeostasis modulator family member 6 [Gene - OMIM - HGNC]
• CDC40:cell division cycle 40 [Gene - OMIM - HGNC]
• CCN6:cellular communication network factor 6 [Gene - OMIM - HGNC]
• CEP57L1:centrosomal protein 57 like 1 [Gene - HGNC]
• COQ3:coenzyme Q3, methyltransferase [Gene - OMIM - HGNC]
• COL10A1:collagen type X alpha 1 chain [Gene - OMIM - HGNC]
• CRYBG1:crystallin beta-gamma domain containing 1 [Gene - OMIM - HGNC]
• CCNC:cyclin C [Gene - OMIM - HGNC]
• CDK19:cyclin dependent kinase 19 [Gene - OMIM - HGNC]
• PDSS2:decaprenyl diphosphate synthase subunit 2 [Gene - OMIM - HGNC]
• DSE:dermatan sulfate epimerase [Gene - OMIM - HGNC]
• DCBLD1:discoidin, CUB and LCCL domain containing 1 [Gene - HGNC]
• FAXC:failed axon connections homolog, metaxin like GST domain containing [Gene - HGNC]
• FAM162B:family with sequence similarity 162 member B [Gene - HGNC]
• FAM229B:family with sequence similarity 229 member B [Gene - HGNC]
• FOXO3:forkhead box O3 [Gene - OMIM - HGNC]
• FHL5:four and a half LIM domains 5 [Gene - OMIM - HGNC]
• FUT9:fucosyltransferase 9 [Gene - OMIM - HGNC]
• FRK:fyn related Src family tyrosine kinase [Gene - OMIM - HGNC]
• GTF3C6:general transcription factor IIIC subunit 6 [Gene - OMIM - HGNC]
• GRIK2:glutamate ionotropic receptor kainate type subunit 2 [Gene - OMIM - HGNC]
• QRSL1:glutaminyl-tRNA amidotransferase subunit QRSL1 [Gene - OMIM - HGNC]
• GOPC:golgi associated PDZ and coiled-coil motif containing [Gene - OMIM - HGNC]
• HS3ST5:heparan sulfate-glucosamine 3-sulfotransferase 5 [Gene - OMIM - HGNC]
• HDAC2:histone deacetylase 2 [Gene - OMIM - HGNC]
• KPNA5:karyopherin subunit alpha 5 [Gene - OMIM - HGNC]
• KLHL32:kelch like family member 32 [Gene - HGNC]
• LAMA4:laminin subunit alpha 4 [Gene - OMIM - HGNC]
• LIN28B:lin-28 homolog B [Gene - OMIM - HGNC]
• MFSD4B:major facilitator superfamily domain containing 4B [Gene - OMIM - HGNC]
• MANEA:mannosidase endo-alpha [Gene - OMIM - HGNC]
• MCHR2:melanin concentrating hormone receptor 2 [Gene - OMIM - HGNC]
• METTL24:methyltransferase like 24 [Gene - HGNC]
• MICAL1:microtubule associated monooxygenase, calponin and LIM domain containing 1 [Gene - OMIM - HGNC]
• MTRES1:mitochondrial transcription rescue factor 1 [Gene - OMIM - HGNC]
• MARCKS:myristoylated alanine rich protein kinase C substrate [Gene - OMIM - HGNC]
• NR2E1:nuclear receptor subfamily 2 group E member 1 [Gene - OMIM - HGNC]
• OSTM1:osteoclastogenesis associated transmembrane protein 1 [Gene - OMIM - HGNC]
• PPIL6:peptidylprolyl isomerase like 6 [Gene - HGNC]
• POPDC3:popeye domain containing 3 [Gene - OMIM - HGNC]
• PREP:prolyl endopeptidase [Gene - OMIM - HGNC]
• RSPH4A:radial spoke head component 4A [Gene - OMIM - HGNC]
• RFX6:regulatory factor X6 [Gene - OMIM - HGNC]
• RFPL4B:ret finger protein like 4B [Gene - HGNC]
• RTN4IP1:reticulon 4 interacting protein 1 [Gene - OMIM - HGNC]
• RPF2:ribosome production factor 2 homolog [Gene - OMIM - HGNC]
• SESN1:sestrin 1 [Gene - OMIM - HGNC]
• SOBP:sine oculis binding protein homolog [Gene - OMIM - HGNC]
• SLC16A10:solute carrier family 16 member 10 [Gene - OMIM - HGNC]
• SLC22A16:solute carrier family 22 member 16 [Gene - OMIM - HGNC]
• SLC35F1:solute carrier family 35 member F1 [Gene - OMIM - HGNC]
• SNX3:sorting nexin 3 [Gene - OMIM - HGNC]
• SMPD2:sphingomyelin phosphodiesterase 2 [Gene - OMIM - HGNC]
• TSTD3:thiosulfate sulfurtransferase like domain containing 3 [Gene - HGNC]
• TRAPPC3L:trafficking protein particle complex subunit 3L [Gene - OMIM - HGNC]
• TUBE1:tubulin epsilon 1 [Gene - OMIM - HGNC]
• USP45:ubiquitin specific peptidase 45 [Gene - OMIM - HGNC]
• VGLL2:vestigial like family member 2 [Gene - OMIM - HGNC]
• ZBTB24:zinc finger and BTB domain containing 24 [Gene - OMIM - HGNC]
• ZUP1:zinc finger containing ubiquitin peptidase 1 [Gene - HGNC]

Variant type:

copy number loss

Cytogenetic location:

6q15-22.2

Genomic location:

Chr6: 92054891 - 118329651 (on Assembly GRCh37)

Preferred name:

GRCh37/hg19 6q15-22.2(chr6:92054891-118329651)

HGVS:

NC_000006.11:g.(?_92054891)_(118329651_?)del

This HGVS expression did not pass validation

Observations:

1