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NM_019844.4(SLCO1B3):c.334T>G (p.Ser112Ala) AND not provided

Clinical significance:Benign (Last evaluated: Nov 12, 2018)

Review status:1 star out of maximum of 4 stars

criteria provided, single submitter

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV001709553.1

Allele description [Variation Report for NM_019844.4(SLCO1B3):c.334T>G (p.Ser112Ala)]

NM_019844.4(SLCO1B3):c.334T>G (p.Ser112Ala)

Genes:
SLCO1B3-SLCO1B7:SLCO1B3-SLCO1B7 readthrough [Gene - HGNC]
SLCO1B3:solute carrier organic anion transporter family member 1B3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
12p12.2
Genomic location:
Preferred name:
NM_019844.4(SLCO1B3):c.334T>G (p.Ser112Ala)
HGVS:
  • NC_000012.12:g.20858546T>G
  • NG_032071.1:g.52843T>G
  • NM_001349920.2:c.250T>G
  • NM_019844.4:c.334T>GMANE SELECT
  • NP_001336849.1:p.Ser84Ala
  • NP_062818.1:p.Ser112Ala
  • NC_000012.11:g.21011480T>G
  • NM_019844.3:c.334T>G
  • Q9NPD5:p.Ser112Ala
Protein change:
S112A
Links:
UniProtKB: Q9NPD5#VAR_024645; dbSNP: rs4149117
NCBI 1000 Genomes Browser:
rs4149117
Molecular consequence:
  • NM_001349920.2:c.250T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_019844.4:c.334T>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001936920GeneDxcriteria provided, single submitter
Benign
(Nov 12, 2018)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV001936920.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Mar 4, 2023