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NM_031443.4(CCM2):c.157G>A (p.Val53Ile) AND not provided

Germline classification:
Benign (1 submission)
Last evaluated:
Mar 3, 2015
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001706363.1

Allele description [Variation Report for NM_031443.4(CCM2):c.157G>A (p.Val53Ile)]

NM_031443.4(CCM2):c.157G>A (p.Val53Ile)

Gene:
CCM2:CCM2 scaffold protein [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7p13
Genomic location:
Preferred name:
NM_031443.4(CCM2):c.157G>A (p.Val53Ile)
HGVS:
  • NC_000007.14:g.45038379G>A
  • NG_016295.1:g.43192G>A
  • NM_001029835.2:c.220G>A
  • NM_001167934.2:c.31-25539G>A
  • NM_001167935.2:c.157G>A
  • NM_001363458.2:c.157G>A
  • NM_001363459.2:c.31-25539G>A
  • NM_031443.4:c.157G>AMANE SELECT
  • NP_001025006.1:p.Val74Ile
  • NP_001161407.1:p.Val53Ile
  • NP_001350387.1:p.Val53Ile
  • NP_113631.1:p.Val53Ile
  • NP_113631.1:p.Val53Ile
  • LRG_664t1:c.220G>A
  • LRG_664t2:c.157G>A
  • LRG_664:g.43192G>A
  • LRG_664p1:p.Val74Ile
  • LRG_664p2:p.Val53Ile
  • NC_000007.13:g.45077978G>A
  • NM_031443.3:c.157G>A
  • NR_030770.2:n.239G>A
  • Q9BSQ5:p.Val53Ile
Protein change:
V53I
Links:
UniProtKB: Q9BSQ5#VAR_023575; dbSNP: rs2107732
NCBI 1000 Genomes Browser:
rs2107732
Molecular consequence:
  • NM_001167934.2:c.31-25539G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001363459.2:c.31-25539G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001029835.2:c.220G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001167935.2:c.157G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001363458.2:c.157G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_031443.4:c.157G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NR_030770.2:n.239G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001888056GeneDx
criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)
Benign
(Mar 3, 2015)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV001888056.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024