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NM_001267550.2(TTN):c.66463+2dup AND Tip-toe gait

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
May 25, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001580381.5

Allele description [Variation Report for NM_001267550.2(TTN):c.66463+2dup]

NM_001267550.2(TTN):c.66463+2dup

Genes:
TTN-AS1:TTN antisense RNA 1 [Gene - HGNC]
TTN:titin [Gene - OMIM - HGNC]
Variant type:
Duplication
Cytogenetic location:
2q31.2
Genomic location:
Preferred name:
NM_001267550.2(TTN):c.66463+2dup
HGVS:
  • NC_000002.12:g.178581904dup
  • NG_011618.3:g.253899dup
  • NG_051363.1:g.64078dup
  • NM_001256850.1:c.61540+2dup
  • NM_001267550.2:c.66463+2dupMANE SELECT
  • NM_003319.4:c.39268+2dup
  • NM_133378.4:c.58759+2dup
  • NM_133432.3:c.39643+2dup
  • NM_133437.4:c.39844+2dup
  • LRG_391:g.253899dup
  • NC_000002.11:g.179446630_179446631insA
  • NC_000002.11:g.179446631dup
Links:
dbSNP: rs1276825352
NCBI 1000 Genomes Browser:
rs1276825352
Molecular consequence:
  • NM_001256850.1:c.61540+2dup - splice donor variant - [Sequence Ontology: SO:0001575]
  • NM_001267550.2:c.66463+2dup - splice donor variant - [Sequence Ontology: SO:0001575]
  • NM_003319.4:c.39268+2dup - splice donor variant - [Sequence Ontology: SO:0001575]
  • NM_133378.4:c.58759+2dup - splice donor variant - [Sequence Ontology: SO:0001575]
  • NM_133432.3:c.39643+2dup - splice donor variant - [Sequence Ontology: SO:0001575]
  • NM_133437.4:c.39844+2dup - splice donor variant - [Sequence Ontology: SO:0001575]

Condition(s)

Name:
Tip-toe gait
Synonyms:
Toe walking
Identifiers:
MedGen: C0427144; Human Phenotype Ontology: HP:0030051

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001810051Practice for Gait Abnormalities, David Pomarino, Competency Network Toe Walking c/o Practice Pomarino
criteria provided, single submitter

(ACMG Guidelines, 2015)
Likely pathogenic
(May 25, 2021)
unknownclinical testing

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyesnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

NGS-Panel Diagnosis Developed for the Differential Diagnosis of Idiopathic Toe Walking and Its Application for the Investigation of Possible Genetic Causes for the Gait Anomaly.

Pomarino D, Emelina A, Heidrich J, Rostásy K, Schirmer S, Schönfeldt JO, Thren A, Wagner F, Thren JR, Berger N.

Glob Med Genet. 2023 Jun;10(2):63-71. doi: 10.1055/s-0043-57230.

PubMed [citation]
PMID:
37091313
PMCID:
PMC10121371

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee.

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Practice for Gait Abnormalities, David Pomarino, Competency Network Toe Walking c/o Practice Pomarino, SCV001810051.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providedclinical testing PubMed (2)

Description

The heterozygous splice variant c.66463 + 2dupT was detected in the TTN gene, which is found in the literature and the Gene databases dbSNP, ClinVar or HGMD has not yet been reported. According to the calculations of the splice site prediction program varSEAK, the duplication of a T nucleotide leads with a high probability ("risk class 5", highest risk score) to the loss of the 5'-donor-splice-site-motif. Similar gene changes in the TTN gene were described in the HGMD database in patients with muscular dystrophy or restrictive cardiomyopathy [O'Grady (2016) Ann Neurol 80, 101; Kühnisch (2019) Clin Genet 96, 549]. Myopathy refers to diseases that affect skeletal Muscles. These diseases attack muscle fibers, making muscles weak. Inherited myopathies are often caused by inheriting an abnormal gene mutation from a parent that causes the disease. Symptoms of congenital myopathies usually start at birth or in early childhood, but may not appear until the teen years or even later in adulthood. Congenital myopathies are somewhat unique compared with other inherited myopathies, as weakness typically affects all muscles and is often not progressive. Symptoms are: Muscle weakness, most commonly of upper arms and shoulders and thighs, muscle cramps, stiffness and spasms, fatigue with exertion and lack of energy. Our patients all walk on tiptoe, so they show similar symptoms. When we genetically test them with our toe walking panel, we find that around 90 per cent of them have a genetic variant that explains their toe walking. These can be assigned, for example, to the area of myopathies (such as variants of the COL6A3 gene), the area of hereditary neuropathies (such as variants of the KMT2C gene) or the area of metabolic diseases (such as variants of the PYGM gene). In a smaller group of patients with almost identical symptoms, no abnormality is found in the genes of our panel, but spastic paraplegia can be detected. In another small group of our toe walkers, no abnormalities can be detected in the genes analysed in our toe walking panel, nor do they suffer from spastic paraplegia, as is also the case with healthy children. In contrast to these, however, they show a tiptoe gait. These patients suffer from infantile cerebral palsy, in which toe walking can also be observed.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 13, 2025