NM_012431.3(SEMA3E):c.322A>C (p.Lys108Gln) AND not provided

Clinical significance:Likely benign (Last evaluated: Apr 28, 2021)

Review status:1 star out of maximum of 4 stars

criteria provided, single submitter

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV001567157.3

Allele description [Variation Report for NM_012431.3(SEMA3E):c.322A>C (p.Lys108Gln)]

NM_012431.3(SEMA3E):c.322A>C (p.Lys108Gln)

Gene:
SEMA3E:semaphorin 3E [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7q21.11
Genomic location:
Preferred name:
NM_012431.3(SEMA3E):c.322A>C (p.Lys108Gln)
HGVS:
  • NC_000007.14:g.83469257T>G
  • NG_021242.2:g.184907A>C
  • NM_001178129.2:c.142A>C
  • NM_012431.3:c.322A>CMANE SELECT
  • NP_001171600.1:p.Lys48Gln
  • NP_036563.1:p.Lys108Gln
  • LRG_1287t1:c.322A>C
  • LRG_1287:g.184907A>C
  • LRG_1287p1:p.Lys108Gln
  • NC_000007.13:g.83098573T>G
  • NM_012431.2:c.322A>C
Protein change:
K108Q
Links:
dbSNP: rs201465097
NCBI 1000 Genomes Browser:
rs201465097
Molecular consequence:
  • NM_001178129.2:c.142A>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_012431.3:c.322A>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001790797GeneDxcriteria provided, single submitter
Likely benign
(Apr 28, 2021)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV001790797.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

In silico analysis supports that this missense variant does not alter protein structure/function; Has not been previously published as pathogenic or benign to our knowledge

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 27, 2021

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