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NM_006206.6(PDGFRA):c.3156G>A (p.Thr1052=) AND not provided

Germline classification:
Likely benign (2 submissions)
Last evaluated:
Jan 1, 2024
Review status:
2 stars out of maximum of 4 stars
criteria provided, multiple submitters, no conflicts
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001565225.8

Allele description [Variation Report for NM_006206.6(PDGFRA):c.3156G>A (p.Thr1052=)]

NM_006206.6(PDGFRA):c.3156G>A (p.Thr1052=)

Gene:
PDGFRA:platelet derived growth factor receptor alpha [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
4q12
Genomic location:
Preferred name:
NM_006206.6(PDGFRA):c.3156G>A (p.Thr1052=)
HGVS:
  • NC_000004.12:g.54295158G>A
  • NG_009250.1:g.71062G>A
  • NM_001347828.2:c.3231G>A
  • NM_001347829.2:c.3156G>A
  • NM_001347830.2:c.3195G>A
  • NM_006206.6:c.3156G>AMANE SELECT
  • NP_001334757.1:p.Thr1077=
  • NP_001334758.1:p.Thr1052=
  • NP_001334759.1:p.Thr1065=
  • NP_006197.1:p.Thr1052=
  • LRG_309t1:c.3156G>A
  • LRG_309:g.71062G>A
  • NC_000004.11:g.55161325G>A
  • NM_006206.4:c.3156G>A
Links:
dbSNP: rs55996208
NCBI 1000 Genomes Browser:
rs55996208
Molecular consequence:
  • NM_001347828.2:c.3231G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001347829.2:c.3156G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001347830.2:c.3195G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_006206.6:c.3156G>A - synonymous variant - [Sequence Ontology: SO:0001819]
Observations:
13

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001788534GeneDx
criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)
Likely benign
(Apr 20, 2021)
germlineclinical testing

Citation Link,

SCV004150646CeGaT Center for Human Genetics Tuebingen
criteria provided, single submitter

(CeGaT Center For Human Genetics Tuebingen Variant Classification Criteria Version 2)
Likely benign
(Jan 1, 2024)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes13not providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV001788534.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From CeGaT Center for Human Genetics Tuebingen, SCV004150646.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided13not providednot providedclinical testingnot provided

Description

PDGFRA: BP4, BP7

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided13not providednot providednot provided

Last Updated: Apr 15, 2024