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NM_000525.4(KCNJ11):c.601C>T (p.Arg201Cys) AND Diabetes mellitus, transient neonatal, 3

Clinical significance:Pathogenic (Last evaluated: Feb 28, 2020)

Review status:1 star out of maximum of 4 stars

criteria provided, single submitter

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV001530196.2

Allele description [Variation Report for NM_000525.4(KCNJ11):c.601C>T (p.Arg201Cys)]

NM_000525.4(KCNJ11):c.601C>T (p.Arg201Cys)

Gene:
KCNJ11:potassium inwardly rectifying channel subfamily J member 11 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11p15.1
Genomic location:
Preferred name:
NM_000525.4(KCNJ11):c.601C>T (p.Arg201Cys)
HGVS:
  • NC_000011.10:g.17387491G>A
  • NG_012446.1:g.6169C>T
  • NM_000525.4:c.601C>TMANE SELECT
  • NM_001166290.2:c.340C>T
  • NM_001377296.1:c.340C>T
  • NM_001377297.1:c.340C>T
  • NP_000516.3:p.Arg201Cys
  • NP_000516.3:p.Arg201Cys
  • NP_001159762.1:p.Arg114Cys
  • NP_001364225.1:p.Arg114Cys
  • NP_001364226.1:p.Arg114Cys
  • NC_000011.9:g.17409038G>A
  • NM_000525.3:c.601C>T
Protein change:
R114C; ARG201CYS
Links:
OMIM: 600937.0004; dbSNP: rs80356625
NCBI 1000 Genomes Browser:
rs80356625
Molecular consequence:
  • NM_000525.4:c.601C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001166290.2:c.340C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001377296.1:c.340C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001377297.1:c.340C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Diabetes mellitus, transient neonatal, 3
Identifiers:
MONDO: MONDO:0012522; MedGen: C1864623; Orphanet: 99886; OMIM: 610582

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001739488Beijing Key Laboratry for Genetics of Birth Defects,Beijing Children's Hospitalcriteria provided, single submitter
Pathogenic
(Feb 28, 2020)
de novoclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
East asiade novoyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Beijing Key Laboratry for Genetics of Birth Defects,Beijing Children's Hospital, SCV001739488.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1East asia1not providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1de novoyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Feb 7, 2023