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NM_000053.4(ATP7B):c.2549C>T (p.Thr850Ile) AND not provided

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Oct 21, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001509442.6

Allele description [Variation Report for NM_000053.4(ATP7B):c.2549C>T (p.Thr850Ile)]

NM_000053.4(ATP7B):c.2549C>T (p.Thr850Ile)

Gene:
ATP7B:ATPase copper transporting beta [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
13q14.3
Genomic location:
Preferred name:
NM_000053.4(ATP7B):c.2549C>T (p.Thr850Ile)
HGVS:
  • NC_000013.11:g.51950298G>A
  • NG_008806.1:g.66197C>T
  • NM_000053.4:c.2549C>TMANE SELECT
  • NM_001005918.3:c.2063C>T
  • NM_001243182.2:c.2216C>T
  • NM_001330578.2:c.2315C>T
  • NM_001330579.2:c.2297C>T
  • NP_000044.2:p.Thr850Ile
  • NP_001005918.1:p.Thr688Ile
  • NP_001230111.1:p.Thr739Ile
  • NP_001317507.1:p.Thr772Ile
  • NP_001317508.1:p.Thr766Ile
  • NC_000013.10:g.52524434G>A
  • NM_000053.3:c.2549C>T
  • p.Thr850Ile
Protein change:
T688I
Links:
dbSNP: rs777629392
NCBI 1000 Genomes Browser:
rs777629392
Molecular consequence:
  • NM_000053.4:c.2549C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001005918.3:c.2063C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001243182.2:c.2216C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001330578.2:c.2315C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001330579.2:c.2297C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
2

Condition(s)

Synonyms:
none provided; RECLASSIFIED - ADRA2C POLYMORPHISM; RECLASSIFIED - ADRB1 POLYMORPHISM
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001716164Mayo Clinic Laboratories, Mayo Clinic
criteria provided, single submitter

(ACMG Guidelines, 2015)
Likely pathogenic
(Oct 21, 2022)
germlineclinical testing

PubMed (7)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown2not providednot providednot providednot providedclinical testing

Citations

PubMed

Six novel ATP7B mutations in Thai patients with Wilson disease.

Panichareon B, Taweechue K, Thongnoppakhun W, Aksornworanart M, Pithukpakorn M, Yenchitsomanus PT, Limwongse C, Limjindaporn T.

Eur J Med Genet. 2011 Mar-Apr;54(2):103-7. doi: 10.1016/j.ejmg.2010.10.008. Epub 2010 Oct 27.

PubMed [citation]
PMID:
21034864

Mutational characterization of ATP7B gene in 103 Wilson's disease patients from Southern China: identification of three novel mutations.

Wei Z, Huang Y, Liu A, Diao S, Yu Q, Peng Z, Hong M.

Neuroreport. 2014 Oct 1;25(14):1075-80. doi: 10.1097/WNR.0000000000000216.

PubMed [citation]
PMID:
25089800
See all PubMed Citations (7)

Details of each submission

From Mayo Clinic Laboratories, Mayo Clinic, SCV001716164.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided2not providednot providedclinical testing PubMed (7)

Description

PP3, PP4, PM2, PS4_moderate

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided2not providednot providednot provided

Last Updated: May 16, 2025