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NM_001142800.2(EYS):c.9185A>G (p.Asn3062Ser) AND Autosomal recessive retinitis pigmentosa

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jul 25, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001278441.1

Allele description [Variation Report for NM_001142800.2(EYS):c.9185A>G (p.Asn3062Ser)]

NM_001142800.2(EYS):c.9185A>G (p.Asn3062Ser)

Genes:
PHF3:PHD finger protein 3 [Gene - OMIM - HGNC]
EYS:eyes shut homolog [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6q12
Genomic location:
Preferred name:
NM_001142800.2(EYS):c.9185A>G (p.Asn3062Ser)
HGVS:
  • NC_000006.12:g.63720846T>C
  • NG_023443.2:g.1991380A>G
  • NG_034034.2:g.90046T>C
  • NM_001142800.2:c.9185A>GMANE SELECT
  • NM_001290259.2:c.*7138T>C
  • NM_001292009.2:c.9248A>G
  • NM_001370348.2:c.*7138T>CMANE SELECT
  • NM_001370349.2:c.*7138T>C
  • NM_001370350.2:c.*7138T>C
  • NM_015153.4:c.*7138T>C
  • NP_001136272.1:p.Asn3062Ser
  • NP_001278938.1:p.Asn3083Ser
  • NC_000006.11:g.64430742T>C
  • NC_000006.11:g.64430742T>C
  • NM_001142800.1:c.9185A>G
Protein change:
N3062S
Links:
dbSNP: rs553840761
NCBI 1000 Genomes Browser:
rs553840761
Molecular consequence:
  • NM_001290259.2:c.*7138T>C - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001370348.2:c.*7138T>C - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001370349.2:c.*7138T>C - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001370350.2:c.*7138T>C - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_015153.4:c.*7138T>C - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001142800.2:c.9185A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001292009.2:c.9248A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Autosomal recessive retinitis pigmentosa
Identifiers:
MedGen: C0339526

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001465454Natera, Inc.
no assertion criteria provided
Uncertain significance
(Jul 25, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV001465454.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024