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NM_000282.4(PCCA):c.1891G>A (p.Gly631Ser) AND Propionic acidemia

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Apr 17, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001277465.1

Allele description

NM_000282.4(PCCA):c.1891G>A (p.Gly631Ser)

Gene:
PCCA:propionyl-CoA carboxylase subunit alpha [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
13q32.3
Genomic location:
Preferred name:
NM_000282.4(PCCA):c.1891G>A (p.Gly631Ser)
HGVS:
  • NC_000013.11:g.100449297G>A
  • NG_008768.1:g.365215G>A
  • NM_000282.4:c.1891G>AMANE SELECT
  • NM_001127692.3:c.1813G>A
  • NM_001178004.2:c.1891G>A
  • NM_001352605.2:c.1845+23566G>A
  • NM_001352606.2:c.1747G>A
  • NM_001352607.2:c.1813G>A
  • NM_001352608.2:c.1669G>A
  • NM_001352609.2:c.1891G>A
  • NM_001352610.2:c.946G>A
  • NM_001352611.2:c.900+23566G>A
  • NM_001352612.2:c.802G>A
  • NP_000273.2:p.Gly631Ser
  • NP_001121164.1:p.Gly605Ser
  • NP_001171475.1:p.Gly631Ser
  • NP_001339535.1:p.Gly583Ser
  • NP_001339536.1:p.Gly605Ser
  • NP_001339537.1:p.Gly557Ser
  • NP_001339538.1:p.Gly631Ser
  • NP_001339539.1:p.Gly316Ser
  • NP_001339541.1:p.Gly268Ser
  • NC_000013.10:g.101101551G>A
  • NM_000282.3:c.1891G>A
  • NR_148027.2:n.2003G>A
  • NR_148028.2:n.1900G>A
  • NR_148029.2:n.1822G>A
  • NR_148030.2:n.2003G>A
  • NR_148031.2:n.1816G>A
Protein change:
G268S
Links:
dbSNP: rs796052018
NCBI 1000 Genomes Browser:
rs796052018
Molecular consequence:
  • NM_001352605.2:c.1845+23566G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001352611.2:c.900+23566G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000282.4:c.1891G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127692.3:c.1813G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001178004.2:c.1891G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001352606.2:c.1747G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001352607.2:c.1813G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001352608.2:c.1669G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001352609.2:c.1891G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001352610.2:c.946G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001352612.2:c.802G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NR_148027.2:n.2003G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_148028.2:n.1900G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_148029.2:n.1822G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_148030.2:n.2003G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_148031.2:n.1816G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Propionic acidemia (PROP)
Synonyms:
Glycinemia, ketotic; Hyperglycinemia with ketoacidosis and leukopenia; Ketotic hyperglycinemia
Identifiers:
MONDO: MONDO:0011628; MedGen: C0268579; Orphanet: 35; OMIM: 606054; Human Phenotype Ontology: HP:0003571

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001464418Natera, Inc.
no assertion criteria provided
Uncertain significance
(Apr 17, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV001464418.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 3, 2022