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NM_015627.3(LDLRAP1):c.605C>A (p.Ser202Tyr) AND Familial hypercholesterolemia

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jan 11, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001275174.1

Allele description [Variation Report for NM_015627.3(LDLRAP1):c.605C>A (p.Ser202Tyr)]

NM_015627.3(LDLRAP1):c.605C>A (p.Ser202Tyr)

Gene:
LDLRAP1:low density lipoprotein receptor adaptor protein 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1p36.11
Genomic location:
Preferred name:
NM_015627.3(LDLRAP1):c.605C>A (p.Ser202Tyr)
Other names:
P202H
HGVS:
  • NC_000001.11:g.25563142C>A
  • NG_008932.1:g.24558C>A
  • NM_015627.3:c.605C>AMANE SELECT
  • NP_056442.2:p.Ser202Tyr
  • NP_056442.2:p.Ser202Tyr
  • LRG_276t1:c.605C>A
  • LRG_276:g.24558C>A
  • LRG_276p1:p.Ser202Tyr
  • NC_000001.10:g.25889633C>A
  • NM_015627.2:c.605C>A
  • p.(Ser202Tyr)
Protein change:
S202Y; PRO202HIS
Links:
OMIM: 605747.0004; dbSNP: rs121908326
NCBI 1000 Genomes Browser:
rs121908326
Molecular consequence:
  • NM_015627.3:c.605C>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Familial hypercholesterolemia
Identifiers:
MONDO: MONDO:0005439; MedGen: C0020445; OMIM: PS143890

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001460019Natera, Inc.
no assertion criteria provided
Uncertain significance
(Jan 11, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV001460019.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 24, 2024