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NM_018367.7(ACER3):c.292T>C (p.Tyr98His) AND Alkaline ceramidase 3 deficiency

Germline classification:
Uncertain significance (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001270148.1

Allele description [Variation Report for NM_018367.7(ACER3):c.292T>C (p.Tyr98His)]

NM_018367.7(ACER3):c.292T>C (p.Tyr98His)

Gene:
ACER3:alkaline ceramidase 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11q13.5
Genomic location:
Preferred name:
NM_018367.7(ACER3):c.292T>C (p.Tyr98His)
HGVS:
  • NC_000011.10:g.76976313T>C
  • NM_001300953.2:c.181T>C
  • NM_001300954.2:c.7T>C
  • NM_001300955.2:c.7T>C
  • NM_018367.7:c.292T>CMANE SELECT
  • NP_001287882.1:p.Tyr61His
  • NP_001287883.1:p.Tyr3His
  • NP_001287884.1:p.Tyr3His
  • NP_060837.3:p.Tyr98His
  • NC_000011.9:g.76687357T>C
  • NM_018367.6:c.292T>C
Protein change:
Y3H
Links:
dbSNP: rs1948442632
NCBI 1000 Genomes Browser:
rs1948442632
Molecular consequence:
  • NM_001300953.2:c.181T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001300954.2:c.7T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001300955.2:c.7T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_018367.7:c.292T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Alkaline ceramidase 3 deficiency
Synonyms:
LEUKODYSTROPHY, PROGRESSIVE, EARLY CHILDHOOD-ONSET
Identifiers:
MONDO: MONDO:0044718; MedGen: C4540358; OMIM: 617762

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001448218Medical Genetics Laboratory, Tarbiat Modares University
no assertion criteria provided
Uncertain significanceinherited, not applicableresearch

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedinheritedyesnot providednot providednot providednot providednot providedresearch
not providednot applicablenot applicablenot providednot providednot providednot providednot providedresearch

Citations

PubMed

Structure of a human intramembrane ceramidase explains enzymatic dysfunction found in leukodystrophy.

Vasiliauskaité-Brooks I, Healey RD, Rochaix P, Saint-Paul J, Sounier R, Grison C, Waltrich-Augusto T, Fortier M, Hoh F, Saied EM, Arenz C, Basu S, Leyrat C, Granier S.

Nat Commun. 2018 Dec 21;9(1):5437. doi: 10.1038/s41467-018-07864-w.

PubMed [citation]
PMID:
30575723
PMCID:
PMC6303388

Details of each submission

From Medical Genetics Laboratory, Tarbiat Modares University, SCV001448218.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearch PubMed (1)
2not providednot providednot providedresearch PubMed (1)
3not providednot providednot providednot providedresearch PubMed (1)

Description

not provided

not provided

Identified a novel variant in ACER3 gene

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot providednot providednot providednot providednot provided
2inheritedyesnot providednot providednot providednot providednot providednot providednot provided
3not applicablenot applicablenot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 23, 2022