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NM_000199.5(SGSH):c.1129C>T (p.Arg377Cys) AND Inborn genetic diseases

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Sep 24, 2018
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001266348.2

Allele description [Variation Report for NM_000199.5(SGSH):c.1129C>T (p.Arg377Cys)]

NM_000199.5(SGSH):c.1129C>T (p.Arg377Cys)

Gene:
SGSH:N-sulfoglucosamine sulfohydrolase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17q25.3
Genomic location:
Preferred name:
NM_000199.5(SGSH):c.1129C>T (p.Arg377Cys)
Other names:
p.Arg377Cys
HGVS:
  • NC_000017.11:g.80210832G>A
  • NG_008229.1:g.14569C>T
  • NG_032778.1:g.45841G>A
  • NM_000199.5:c.1129C>TMANE SELECT
  • NM_001352921.3:c.*216C>T
  • NM_001352922.2:c.*179C>T
  • NP_000190.1:p.Arg377Cys
  • LRG_1330:g.45841G>A
  • NC_000017.10:g.78184631G>A
  • NM_000199.3:c.1129C>T
  • NR_148201.2:n.1043C>T
Protein change:
R377C
Links:
dbSNP: rs772311757
NCBI 1000 Genomes Browser:
rs772311757
Molecular consequence:
  • NM_001352921.3:c.*216C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001352922.2:c.*179C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_000199.5:c.1129C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NR_148201.2:n.1043C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
Functional consequence:
Unknown function
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001444522Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Pathogenic
(Sep 24, 2018)
germlineclinical testing

PubMed (7)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Syriangermlineyes1not providednot provided1not providedclinical testing

Citations

PubMed

Identification and characterization of mutations underlying Sanfilippo syndrome type A (mucopolysaccharidosis type IIIA).

Lee-Chen GJ, Lin SP, Ko MH, Chuang CK, Chen CP, Lee HH, Cheng SC, Shen CH, Tseng KL, Li CL.

Clin Genet. 2002 Mar;61(3):192-7.

PubMed [citation]
PMID:
12000360

Identification of molecular defects in Italian Sanfilippo A patients including 13 novel mutations.

Di Natale P, Balzano N, Esposito S, Villani GR.

Hum Mutat. 1998;11(4):313-20.

PubMed [citation]
PMID:
9554748
See all PubMed Citations (7)

Details of each submission

From Ambry Genetics, SCV001444522.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Syrian1not providednot providedclinical testing PubMed (7)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Jan 13, 2025