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NM_000049.4(ASPA):c.806C>T (p.Thr269Met) AND Fraser syndrome 3

Germline classification:
Uncertain significance (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001251015.11

Allele description [Variation Report for NM_000049.4(ASPA):c.806C>T (p.Thr269Met)]

NM_000049.4(ASPA):c.806C>T (p.Thr269Met)

Genes:
ASPA:aspartoacylase [Gene - OMIM - HGNC]
SPATA22:spermatogenesis associated 22 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17p13.2
Genomic location:
Preferred name:
NM_000049.4(ASPA):c.806C>T (p.Thr269Met)
HGVS:
  • NC_000017.11:g.3498952C>T
  • NG_008399.2:g.30307C>T
  • NG_008399.3:g.29844C>T
  • NM_000049.4:c.806C>TMANE SELECT
  • NM_001128085.1:c.806C>T
  • NM_001321336.2:c.-74+14460G>A
  • NM_001321337.2:c.-74+14460G>A
  • NP_000040.1:p.Thr269Met
  • NP_001121557.1:p.Thr269Met
  • NC_000017.10:g.3402246C>T
  • NM_000049.2:c.806C>T
Protein change:
T269M
Links:
dbSNP: rs773849106
NCBI 1000 Genomes Browser:
rs773849106
Molecular consequence:
  • NM_001321336.2:c.-74+14460G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001321337.2:c.-74+14460G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000049.4:c.806C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001128085.1:c.806C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Fraser syndrome 3
Identifiers:
MONDO: MONDO:0054739; MedGen: C4540040; OMIM: 617667

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001424925Department of Molecular Biology and Genetics, Acibadem University
no assertion criteria provided
Uncertain significanceunknownresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Department of Molecular Biology and Genetics, Acibadem University, SCV001424925.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jun 8, 2025