NM_000094.4(COL7A1):c.5086C>T (p.Arg1696Cys) AND Dystrophic epidermolysis bullosa

Clinical significance:Uncertain significance (Last evaluated: Apr 27, 2017)

Review status:1 star out of maximum of 4 stars

criteria provided, single submitter

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV001144357.1

Allele description [Variation Report for NM_000094.4(COL7A1):c.5086C>T (p.Arg1696Cys)]

NM_000094.4(COL7A1):c.5086C>T (p.Arg1696Cys)

Gene:
COL7A1:collagen type VII alpha 1 chain [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p21.31
Genomic location:
Preferred name:
NM_000094.4(COL7A1):c.5086C>T (p.Arg1696Cys)
HGVS:
  • NC_000003.12:g.48580311G>A
  • NG_007065.1:g.19942C>T
  • NM_000094.4:c.5086C>TMANE SELECT
  • NP_000085.1:p.Arg1696Cys
  • LRG_286t1:c.5086C>T
  • LRG_286:g.19942C>T
  • NC_000003.11:g.48617744G>A
  • NM_000094.3:c.5086C>T
Protein change:
R1696C
Links:
Molecular consequence:
  • NM_000094.4:c.5086C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Dystrophic epidermolysis bullosa
Synonyms:
Epidermolysis Bullosa Dystrophica; Severe generalized recessive dystrophic epidermolysis bullosa; RDEB-sev gen; See all synonyms [MedGen]
Identifiers:
MedGen: C0079294

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001304950Illumina Clinical Services Laboratory,Illuminacriteria provided, single submitter
Uncertain significance
(Apr 27, 2017)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Prenatal diagnosis for epidermolysis bullosa: a study of 144 consecutive pregnancies at risk.

Pfendner EG, Nakano A, Pulkkinen L, Christiano AM, Uitto J.

Prenat Diagn. 2003 Jun;23(6):447-56.

PubMed [citation]
PMID:
12813757

Details of each submission

From Illumina Clinical Services Laboratory,Illumina, SCV001304950.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)

Description

This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). Publications were found based on this search. However, the evidence from the literature, in combination with allele frequency data from public databases where available, was not sufficient to rule this variant in or out of causing disease. Therefore, this variant is classified as a variant of unknown significance.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 12, 2021

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