NM_182961.4(SYNE1):c.13863G>A (p.Thr4621=) AND not provided

Clinical significance:Likely benign (Last evaluated: Jan 6, 2021)

Review status:2 stars out of maximum of 4 stars

criteria provided, multiple submitters, no conflicts

Based on:
2 submissions [Details]
Record status:
current
Accession:
RCV001092458.3

Allele description [Variation Report for NM_182961.4(SYNE1):c.13863G>A (p.Thr4621=)]

NM_182961.4(SYNE1):c.13863G>A (p.Thr4621=)

Gene:
SYNE1:spectrin repeat containing nuclear envelope protein 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6q25.2
Genomic location:
Preferred name:
NM_182961.4(SYNE1):c.13863G>A (p.Thr4621=)
HGVS:
  • NC_000006.12:g.152330822C>T
  • NG_012855.1:g.311578G>A
  • NG_012855.2:g.311578G>A
  • NM_033071.3:c.13650G>A
  • NM_182961.4:c.13863G>AMANE SELECT
  • NP_149062.1:p.Thr4550=
  • NP_892006.3:p.Thr4621=
  • LRG_427t1:c.13863G>A
  • LRG_427t2:c.13650G>A
  • LRG_427:g.311578G>A
  • LRG_427p1:p.Thr4621=
  • LRG_427p2:p.Thr4550=
  • NC_000006.11:g.152651957C>T
  • NM_182961.2:c.13863G>A
Links:
dbSNP: rs112266645
NCBI 1000 Genomes Browser:
rs112266645
Molecular consequence:
  • NM_033071.3:c.13650G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_182961.4:c.13863G>A - synonymous variant - [Sequence Ontology: SO:0001819]
Observations:
1

Condition(s)

Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000714502GeneDxcriteria provided, single submitter
Likely benign
(Jan 6, 2021)
germlineclinical testing

Citation Link,

SCV001248978CeGaT Praxis fuer Humangenetik Tuebingencriteria provided, single submitter
Likely benign
(Dec 1, 2019)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000714502.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From CeGaT Praxis fuer Humangenetik Tuebingen, SCV001248978.6

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Oct 6, 2021

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