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NM_183065.4(TMEM107):c.*751C>T AND not provided

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Mar 1, 2025
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001092408.25

Allele description [Variation Report for NM_183065.4(TMEM107):c.*751C>T]

NM_183065.4(TMEM107):c.*751C>T

Genes:
SNORD118:small nucleolar RNA, C/D box 118 [Gene - OMIM - HGNC]
TMEM107:transmembrane protein 107 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17p13.1
Genomic location:
Preferred name:
NM_183065.4(TMEM107):c.*751C>T
HGVS:
  • NC_000017.11:g.8173452G>A
  • NG_054916.1:g.7960C>T
  • NG_056674.1:g.5137C>T
  • NM_001351278.2:c.*751C>T
  • NM_001351279.2:c.*751C>T
  • NM_001351280.2:c.*751C>T
  • NM_032354.3:c.*751C>T
  • NM_032354.5:c.*751C>T
  • NM_183065.4:c.*751C>TMANE SELECT
  • LRG_1204:g.5137C>T
  • NC_000017.10:g.8076770G>A
  • NM_183065.4:c.*751C>T
  • NR_147092.2:n.1002C>T
Links:
dbSNP: rs117595965
NCBI 1000 Genomes Browser:
rs117595965
Molecular consequence:
  • NM_001351278.2:c.*751C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001351279.2:c.*751C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001351280.2:c.*751C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_032354.5:c.*751C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_183065.4:c.*751C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NR_147092.2:n.1002C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
Observations:
21

Condition(s)

Synonyms:
none provided; RECLASSIFIED - ADRA2C POLYMORPHISM; RECLASSIFIED - ADRB1 POLYMORPHISM
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001248912CeGaT Center for Human Genetics Tuebingen
criteria provided, single submitter

(CeGaT Center For Human Genetics Tuebingen Variant Classification Criteria Version 2)
Pathogenic
(Mar 1, 2025)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes21not providednot providednot providednot providedclinical testing

Details of each submission

From CeGaT Center for Human Genetics Tuebingen, SCV001248912.29

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided21not providednot providedclinical testingnot provided

Description

SNORD118: PM3:Very Strong, PM2:Supporting, PS3:Supporting

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided21not providednot providednot provided

Last Updated: Apr 28, 2025