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NM_001122769.3(LCA5):c.647C>G (p.Pro216Arg) AND Retinal dystrophy

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Sep 26, 2018
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001073262.1

Allele description [Variation Report for NM_001122769.3(LCA5):c.647C>G (p.Pro216Arg)]

NM_001122769.3(LCA5):c.647C>G (p.Pro216Arg)

Gene:
LCA5:lebercilin LCA5 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6q14.1
Genomic location:
Preferred name:
NM_001122769.3(LCA5):c.647C>G (p.Pro216Arg)
HGVS:
  • NC_000006.12:g.79513285G>C
  • NG_016011.1:g.29146C>G
  • NM_001122769.3:c.647C>GMANE SELECT
  • NM_181714.4:c.647C>G
  • NP_001116241.1:p.Pro216Arg
  • NP_859065.2:p.Pro216Arg
  • NC_000006.11:g.80223002G>C
  • NM_181714.3:c.647C>G
Protein change:
P216R
Links:
dbSNP: rs1766296436
NCBI 1000 Genomes Browser:
rs1766296436
Molecular consequence:
  • NM_001122769.3:c.647C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_181714.4:c.647C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Retinal dystrophy
Identifiers:
MONDO: MONDO:0019118; MeSH: D058499; MedGen: C0854723; Human Phenotype Ontology: HP:0000556

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001238798Blueprint Genetics
criteria provided, single submitter

(Blueprint Genetics Variant Classification Scheme)
Uncertain significance
(Sep 26, 2018)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Blueprint Genetics, SCV001238798.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 1, 2023