NM_030973.4(MED25):c.1483-7C>T AND Basel-Vanagaite-Smirin-Yosef syndrome

Clinical significance:Benign (Last evaluated: Aug 5, 2020)

Review status:1 star out of maximum of 4 stars

criteria provided, single submitter

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV001001534.3

Allele description [Variation Report for NM_030973.4(MED25):c.1483-7C>T]

NM_030973.4(MED25):c.1483-7C>T

Gene:
MED25:mediator complex subunit 25 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19q13.33
Genomic location:
Preferred name:
NM_030973.4(MED25):c.1483-7C>T
HGVS:
  • NC_000019.10:g.49834979C>T
  • NG_017091.1:g.21701C>T
  • NM_001378355.1:c.1483-7C>T
  • NM_030973.4:c.1483-7C>TMANE SELECT
  • LRG_368t1:c.1483-7C>T
  • LRG_368:g.21701C>T
  • NC_000019.9:g.50338236C>T
  • NM_030973.3:c.1483-7C>T
Links:
dbSNP: rs2017698
NCBI 1000 Genomes Browser:
rs2017698
Molecular consequence:
  • NM_001378355.1:c.1483-7C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_030973.4:c.1483-7C>T - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:
Basel-Vanagaite-Smirin-Yosef syndrome (BVSYS)
Identifiers:
MONDO: MONDO:0014643; MedGen: C4225323; OMIM: 616449

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001158852ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratoriescriteria provided, single submitter
Benign
(Aug 5, 2020)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories, SCV001158852.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 27, 2021

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