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NM_001378373.1(MBL2):c.154C>T (p.Arg52Cys) AND Cystic fibrosis

Clinical significance:risk factor (Last evaluated: Apr 1, 2019)

Review status:(0/4) 0 stars out of maximum of 4 stars

no assertion criteria provided

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV000991134.2

Allele description [Variation Report for NM_001378373.1(MBL2):c.154C>T (p.Arg52Cys)]

NM_001378373.1(MBL2):c.154C>T (p.Arg52Cys)

Gene:
MBL2:mannose binding lectin 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
10q21.1
Genomic location:
Preferred name:
NM_001378373.1(MBL2):c.154C>T (p.Arg52Cys)
Other names:
R52C
HGVS:
  • NC_000010.11:g.52771482G>A
  • NG_008196.1:g.5219C>T
  • NM_000242.3:c.154C>T
  • NM_001378373.1:c.154C>TMANE SELECT
  • NM_001378374.1:c.154C>T
  • NP_000233.1:p.Arg52Cys
  • NP_001365302.1:p.Arg52Cys
  • NP_001365303.1:p.Arg52Cys
  • LRG_154t1:c.154C>T
  • LRG_154:g.5219C>T
  • NC_000010.10:g.54531242G>A
  • NG_008196.1:p.Arg52Cys
  • NM_000242.2:c.154C>T
  • P11226:p.Arg52Cys
Protein change:
ARG52CYS
Links:
Genetic Testing Registry (GTR): GTR000509360; UniProtKB: P11226#VAR_008543; OMIM: 154545.0003; dbSNP: rs5030737
NCBI 1000 Genomes Browser:
rs5030737
Molecular consequence:
  • NM_000242.3:c.154C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001378373.1:c.154C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001378374.1:c.154C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Cystic fibrosis (CF)
Synonyms:
Mucoviscidosis
Identifiers:
MONDO: MONDO:0009061; MedGen: C0010674; Orphanet: 586; OMIM: 219700

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001142521Center for Computational Genomics and Data Science,University of Alabamano assertion criteria providedrisk factor
(Apr 1, 2019)
germlineresearch

PubMed (9)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes21not provided3not providedresearch

Citations

PubMed

Complex two-gene modulation of lung disease severity in children with cystic fibrosis.

Dorfman R, Sandford A, Taylor C, Huang B, Frangolias D, Wang Y, Sang R, Pereira L, Sun L, Berthiaume Y, Tsui LC, Paré PD, Durie P, Corey M, Zielenski J.

J Clin Invest. 2008 Mar;118(3):1040-9. doi: 10.1172/JCI33754.

PubMed [citation]
PMID:
18292811
PMCID:
PMC2248329

Association of mannose-binding lectin gene heterogeneity with severity of lung disease and survival in cystic fibrosis.

Garred P, Pressler T, Madsen HO, Frederiksen B, Svejgaard A, Høiby N, Schwartz M, Koch C.

J Clin Invest. 1999 Aug;104(4):431-7.

PubMed [citation]
PMID:
10449435
PMCID:
PMC408526
See all PubMed Citations (9)

Details of each submission

From Center for Computational Genomics and Data Science,University of Alabama, SCV001142521.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided2not providednot providedresearch PubMed (9)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes3not providednot provided2not provided1not provided

Last Updated: Mar 4, 2023