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NM_001126108.2(SLC12A3):c.509T>C (p.Leu170Pro) AND Familial hypokalemia-hypomagnesemia

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Sep 24, 2018
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000786876.2

Allele description [Variation Report for NM_001126108.2(SLC12A3):c.509T>C (p.Leu170Pro)]

NM_001126108.2(SLC12A3):c.509T>C (p.Leu170Pro)

Gene:
SLC12A3:solute carrier family 12 member 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
16q13
Genomic location:
Preferred name:
NM_001126108.2(SLC12A3):c.509T>C (p.Leu170Pro)
HGVS:
  • NC_000016.10:g.56869732T>C
  • NG_009386.1:g.9526T>C
  • NM_000339.3:c.509T>C
  • NM_001126107.2:c.506T>C
  • NM_001126108.2:c.509T>CMANE SELECT
  • NP_000330.3:p.Leu170Pro
  • NP_001119579.2:p.Leu169Pro
  • NP_001119580.2:p.Leu170Pro
  • NC_000016.9:g.56903644T>C
  • NM_000339.2:c.509T>C
Protein change:
L169P
Links:
dbSNP: rs1596890176
NCBI 1000 Genomes Browser:
rs1596890176
Molecular consequence:
  • NM_000339.3:c.509T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001126107.2:c.506T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001126108.2:c.509T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Familial hypokalemia-hypomagnesemia (GTLMNS)
Synonyms:
Potassium and magnesium depletion; Hypomagnesemia-hypokalemia, primary renotubular, with hypocalciuria
Identifiers:
MONDO: MONDO:0009904; MedGen: C0268450; Orphanet: 358; OMIM: 263800

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000925773Bioscientia Institut fuer Medizinische Diagnostik GmbH, Sonic Healthcare
no assertion criteria provided
Likely pathogenic
(Sep 24, 2018)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Bioscientia Institut fuer Medizinische Diagnostik GmbH, Sonic Healthcare, SCV000925773.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Mar 4, 2023