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NM_002474.3(MYH11):c.4158C>T (p.Thr1386=) AND not provided

Germline classification:
Benign/Likely benign (3 submissions)
Last evaluated:
Mar 1, 2025
Review status:
2 stars out of maximum of 4 stars
criteria provided, multiple submitters, no conflicts
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000757514.43

Allele description [Variation Report for NM_002474.3(MYH11):c.4158C>T (p.Thr1386=)]

NM_002474.3(MYH11):c.4158C>T (p.Thr1386=)

Genes:
MYH11:myosin heavy chain 11 [Gene - OMIM - HGNC]
NDE1:nudE neurodevelopment protein 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
16p13.11
Genomic location:
Preferred name:
NM_002474.3(MYH11):c.4158C>T (p.Thr1386=)
Other names:
p.T1386T:ACC>ACT
HGVS:
  • NC_000016.10:g.15724368G>A
  • NG_009299.1:g.137663C>T
  • NG_021210.1:g.86102G>A
  • NM_001040113.2:c.4179C>T
  • NM_001040114.2:c.4179C>T
  • NM_001143979.2:c.*117G>A
  • NM_002474.3:c.4158C>TMANE SELECT
  • NM_017668.3:c.*117G>AMANE SELECT
  • NM_022844.3:c.4158C>T
  • NP_001035202.1:p.Thr1393=
  • NP_001035203.1:p.Thr1393=
  • NP_002465.1:p.Thr1386=
  • NP_074035.1:p.Thr1386=
  • LRG_1401t1:c.4158C>T
  • LRG_1401t2:c.4179C>T
  • LRG_1401:g.137663C>T
  • LRG_1401p1:p.Thr1386=
  • LRG_1401p2:p.Thr1393=
  • NC_000016.9:g.15818225G>A
  • NM_001040113.1:c.4179C>T
  • NM_001143979.1:c.*117G>A
  • NM_002474.2:c.4158C>T
  • p.Thr1386Thr
Links:
dbSNP: rs112377790
NCBI 1000 Genomes Browser:
rs112377790
Molecular consequence:
  • NM_001143979.2:c.*117G>A - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_017668.3:c.*117G>A - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001040113.2:c.4179C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001040114.2:c.4179C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_002474.3:c.4158C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_022844.3:c.4158C>T - synonymous variant - [Sequence Ontology: SO:0001819]
Observations:
65

Condition(s)

Synonyms:
none provided; RECLASSIFIED - ADRA2C POLYMORPHISM; RECLASSIFIED - ADRB1 POLYMORPHISM
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000885767ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories
criteria provided, single submitter

(ARUP Molecular Germline Variant Investigation Process 2024)
Benign
(Nov 20, 2023)
germlineclinical testing

Citation Link,

SCV001150821CeGaT Center for Human Genetics Tuebingen
criteria provided, single submitter

(CeGaT Center For Human Genetics Tuebingen Variant Classification Criteria Version 2)
Benign
(Mar 1, 2025)
germlineclinical testing

Citation Link,

SCV005217534Breakthrough Genomics, Breakthrough Genomics
criteria provided, single submitter

(ACMG Guidelines, 2015)
Likely benigngermlinenot provided

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes65not providednot providednot providednot providedclinical testing, not provided
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee.

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories, SCV000885767.7

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

From CeGaT Center for Human Genetics Tuebingen, SCV001150821.30

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided65not providednot providedclinical testingnot provided

Description

MYH11: BP4, BP7, BS1, BS2; NDE1: BS1, BS2

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided65not providednot providednot provided

From Breakthrough Genomics, Breakthrough Genomics, SCV005217534.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providednot provided PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 3, 2025