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NM_001015877.2(PHF6):c.139-11_139-7del AND not specified

Germline classification:
Likely benign (1 submission)
Last evaluated:
Nov 2, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000729886.4

Allele description [Variation Report for NM_001015877.2(PHF6):c.139-11_139-7del]

NM_001015877.2(PHF6):c.139-11_139-7del

Gene:
PHF6:PHD finger protein 6 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
Xq26.2
Genomic location:
Preferred name:
NM_001015877.2(PHF6):c.139-11_139-7del
HGVS:
  • NC_000023.11:g.134377994_134377998del
  • NG_008886.1:g.9683_9687del
  • NM_001015877.2:c.139-11_139-7delMANE SELECT
  • NM_032335.3:c.139-11_139-7del
  • NM_032458.3:c.139-11_139-7del
  • LRG_629t2:c.139-11_139-7del
  • LRG_629:g.9683_9687del
  • NC_000023.10:g.133512021_133512025del
  • NC_000023.10:g.133512024_133512028del
  • NM_032458.2:c.139-11_139-7del
  • NM_032458.2:c.139-11_139-7delGTAAT
Links:
dbSNP: rs781657256
NCBI 1000 Genomes Browser:
rs781657256
Molecular consequence:
  • NM_001015877.2:c.139-11_139-7del - intron variant - [Sequence Ontology: SO:0001627]
  • NM_032335.3:c.139-11_139-7del - intron variant - [Sequence Ontology: SO:0001627]
  • NM_032458.3:c.139-11_139-7del - intron variant - [Sequence Ontology: SO:0001627]
Observations:
1

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000857580Eurofins Ntd Llc (ga)
criteria provided, single submitter

(EGL Classification Definitions 2015)
Likely benign
(Nov 2, 2017)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot providednot providednot providedclinical testing

Details of each submission

From Eurofins Ntd Llc (ga), SCV000857580.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided1not providednot providednot provided

Last Updated: Sep 29, 2024