NM_004006.3(DMD):c.2539A>G (p.Thr847Ala) AND not provided

Clinical significance:Conflicting interpretations of pathogenicity, Benign(1);Uncertain significance(1) (Last evaluated: Jun 26, 2020)

Review status:1 star out of maximum of 4 stars

criteria provided, conflicting interpretations

Based on:
2 submissions [Details]
Record status:
current
Accession:
RCV000724731.2

Allele description [Variation Report for NM_004006.3(DMD):c.2539A>G (p.Thr847Ala)]

NM_004006.3(DMD):c.2539A>G (p.Thr847Ala)

Gene:
DMD:dystrophin [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xp21.1
Genomic location:
Preferred name:
NM_004006.3(DMD):c.2539A>G (p.Thr847Ala)
HGVS:
  • NC_000023.11:g.32491360T>C
  • NG_012232.1:g.853250A>G
  • NM_000109.4:c.2515A>G
  • NM_004006.2:c.2539A>G
  • NM_004006.3:c.2539A>GMANE SELECT
  • NM_004009.3:c.2527A>G
  • NM_004010.3:c.2170A>G
  • NP_000100.3:p.Thr839Ala
  • NP_003997.1:p.Thr847Ala
  • NP_003997.2:p.Thr847Ala
  • NP_004000.1:p.Thr843Ala
  • NP_004001.1:p.Thr724Ala
  • LRG_199t1:c.2539A>G
  • LRG_199:g.853250A>G
  • LRG_199p1:p.Thr847Ala
  • NC_000023.10:g.32509477T>C
Protein change:
T724A
Links:
dbSNP: rs138145424
NCBI 1000 Genomes Browser:
rs138145424
Molecular consequence:
  • NM_000109.4:c.2515A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_004006.2:c.2539A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_004006.3:c.2539A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_004009.3:c.2527A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_004010.3:c.2170A>G - missense variant - [Sequence Ontology: SO:0001583]
Observations:
2

Condition(s)

Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000227672EGL Genetic Diagnostics, Eurofins Clinical Diagnosticscriteria provided, single submitter
Uncertain significance
(Jun 13, 2017)
germlineclinical testing

Citation Link,

SCV000619814GeneDxcriteria provided, single submitter
Benign
(Jun 26, 2020)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing
not providedgermlineunknown2not providednot providednot providednot providedclinical testing

Details of each submission

From EGL Genetic Diagnostics, Eurofins Clinical Diagnostics, SCV000227672.5

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided2not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided2not providednot providednot provided

From GeneDx, SCV000619814.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 25, 2021

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