NM_001330260.2(SCN8A):c.3822C>T (p.Val1274=) AND History of neurodevelopmental disorder

Clinical significance:Likely benign (Last evaluated: Oct 12, 2016)

Review status:1 star out of maximum of 4 stars

criteria provided, single submitter

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV000717226.1

Allele description [Variation Report for NM_001330260.2(SCN8A):c.3822C>T (p.Val1274=)]

NM_001330260.2(SCN8A):c.3822C>T (p.Val1274=)

Gene:
SCN8A:sodium voltage-gated channel alpha subunit 8 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
12q13.13
Genomic location:
Preferred name:
NM_001330260.2(SCN8A):c.3822C>T (p.Val1274=)
Other names:
p.V1274V:GTC>GTT
HGVS:
  • NC_000012.12:g.51780651C>T
  • NG_021180.3:g.195694C>T
  • NM_001177984.3:c.3820-5891C>T
  • NM_001330260.2:c.3822C>TMANE SELECT
  • NM_001369788.1:c.3820-5891C>T
  • NM_014191.4:c.3822C>T
  • NM_014191.4:c.3822C>T
  • NP_001317189.1:p.Val1274=
  • NP_055006.1:p.Val1274=
  • LRG_1389t1:c.3822C>T
  • LRG_1389t2:c.3822C>T
  • LRG_1389:g.195694C>T
  • LRG_1389p1:p.Val1274=
  • LRG_1389p2:p.Val1274=
  • NC_000012.11:g.52174435C>T
  • NM_014191.2:c.3822C>T
  • NM_014191.3:c.3822C>T
Links:
dbSNP: rs187327463
NCBI 1000 Genomes Browser:
rs187327463
Molecular consequence:
  • NM_001177984.3:c.3820-5891C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001369788.1:c.3820-5891C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001330260.2:c.3822C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_014191.4:c.3822C>T - synonymous variant - [Sequence Ontology: SO:0001819]
Observations:
1

Condition(s)

Name:
History of neurodevelopmental disorder
Identifiers:
MedGen: C2711754

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000848075Ambry Geneticscriteria provided, single submitter
Likely benign
(Oct 12, 2016)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV000848075.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided

Description

In silico models in agreement (benign);Synonymous alterations with insufficient evidence to classify as benign

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknown1not providednot provided1not providednot providednot provided

Last Updated: Nov 20, 2021

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