NM_153026.3(PRICKLE1):c.2304C>G (p.Ser768=) AND Seizures

Clinical significance:Likely benign (Last evaluated: Mar 13, 2016)

Review status:1 star out of maximum of 4 stars

criteria provided, single submitter

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV000716961.1

Allele description [Variation Report for NM_153026.3(PRICKLE1):c.2304C>G (p.Ser768=)]

NM_153026.3(PRICKLE1):c.2304C>G (p.Ser768=)

Gene:
PRICKLE1:prickle planar cell polarity protein 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
12q12
Genomic location:
Preferred name:
NM_153026.3(PRICKLE1):c.2304C>G (p.Ser768=)
Other names:
p.S768S:TCC>TCG
HGVS:
  • NC_000012.12:g.42460001G>C
  • NG_012965.1:g.134770C>G
  • NM_001144881.2:c.2304C>G
  • NM_001144882.2:c.2304C>G
  • NM_001144883.2:c.2304C>G
  • NM_153026.3:c.2304C>GMANE SELECT
  • NP_001138353.1:p.Ser768=
  • NP_001138354.1:p.Ser768=
  • NP_001138355.1:p.Ser768=
  • NP_694571.2:p.Ser768=
  • NC_000012.11:g.42853803G>C
  • NM_153026.2:c.2304C>G
  • NP_694571.2:p.(=)
Links:
dbSNP: rs35854729
NCBI 1000 Genomes Browser:
rs35854729
Molecular consequence:
  • NM_001144881.2:c.2304C>G - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001144882.2:c.2304C>G - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001144883.2:c.2304C>G - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_153026.3:c.2304C>G - synonymous variant - [Sequence Ontology: SO:0001819]
Observations:
1

Condition(s)

Name:
Seizures
Identifiers:
MedGen: C0036572; Human Phenotype Ontology: HP:0001250

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000847806Ambry Geneticscriteria provided, single submitter
Likely benign
(Mar 13, 2016)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV000847806.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided

Description

In silico models in agreement (benign) ;Synonymous alterations with insufficient evidence to classify as benign

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknown1not providednot provided1not providednot providednot provided

Last Updated: Jun 14, 2021

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