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NM_152296.5(ATP1A3):c.2266C>T (p.Arg756Cys) AND Inborn genetic diseases

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Feb 16, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000624914.3

Allele description [Variation Report for NM_152296.5(ATP1A3):c.2266C>T (p.Arg756Cys)]

NM_152296.5(ATP1A3):c.2266C>T (p.Arg756Cys)

Gene:
ATP1A3:ATPase Na+/K+ transporting subunit alpha 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19q13.2
Genomic location:
Preferred name:
NM_152296.5(ATP1A3):c.2266C>T (p.Arg756Cys)
HGVS:
  • NC_000019.10:g.41970540G>A
  • NG_008015.1:g.28691C>T
  • NM_001256213.2:c.2299C>T
  • NM_001256214.2:c.2305C>T
  • NM_152296.5:c.2266C>TMANE SELECT
  • NP_001243142.1:p.Arg767Cys
  • NP_001243143.1:p.Arg769Cys
  • NP_689509.1:p.Arg756Cys
  • LRG_1186t1:c.2266C>T
  • LRG_1186:g.28691C>T
  • LRG_1186p1:p.Arg756Cys
  • NC_000019.9:g.42474692G>A
  • NM_001256214.2:c.2305C>T
  • NM_152296.3:c.2266C>T
  • NM_152296.4:c.2266C>T
Protein change:
R756C
Links:
dbSNP: rs1064797245
NCBI 1000 Genomes Browser:
rs1064797245
Molecular consequence:
  • NM_001256213.2:c.2299C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001256214.2:c.2305C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_152296.5:c.2266C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000741354Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Pathogenic
(Feb 16, 2016)
germlineclinical testing

PubMed (5)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Caucasiangermlineyes1not providednot provided1not providedclinical testing

Citations

PubMed

ATP1A3 mutations in infants: a new rapid-onset dystonia-Parkinsonism phenotype characterized by motor delay and ataxia.

Brashear A, Mink JW, Hill DF, Boggs N, McCall WV, Stacy MA, Snively B, Light LS, Sweadner KJ, Ozelius LJ, Morrison L.

Dev Med Child Neurol. 2012 Nov;54(11):1065-7. doi: 10.1111/j.1469-8749.2012.04421.x. Epub 2012 Aug 28. Review.

PubMed [citation]
PMID:
22924536
PMCID:
PMC3465467

The expanding clinical and genetic spectrum of ATP1A3-related disorders.

Rosewich H, Ohlenbusch A, Huppke P, Schlotawa L, Baethmann M, Carrilho I, Fiori S, Lourenço CM, Sawyer S, Steinfeld R, Gärtner J, Brockmann K.

Neurology. 2014 Mar 18;82(11):945-55. doi: 10.1212/WNL.0000000000000212. Epub 2014 Feb 12.

PubMed [citation]
PMID:
24523486
See all PubMed Citations (5)

Details of each submission

From Ambry Genetics, SCV000741354.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Caucasian1not providednot providedclinical testing PubMed (5)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Mar 16, 2024