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NM_001374828.1(ARID1B):c.4362T>A (p.Tyr1454Ter) AND Inborn genetic diseases

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Oct 21, 2015
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000623647.2

Allele description [Variation Report for NM_001374828.1(ARID1B):c.4362T>A (p.Tyr1454Ter)]

NM_001374828.1(ARID1B):c.4362T>A (p.Tyr1454Ter)

Gene:
ARID1B:AT-rich interaction domain 1B [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6q25.3
Genomic location:
Preferred name:
NM_001374828.1(ARID1B):c.4362T>A (p.Tyr1454Ter)
HGVS:
  • NC_000006.12:g.157196295T>A
  • NG_066624.1:g.425270T>A
  • NM_001363725.2:c.1863T>A
  • NM_001371656.1:c.4242T>A
  • NM_001374820.1:c.4242T>A
  • NM_001374828.1:c.4362T>AMANE SELECT
  • NM_017519.3:c.4203T>A
  • NM_020732.3:c.3993T>A
  • NP_001350654.1:p.Tyr621Ter
  • NP_001358585.1:p.Tyr1414Ter
  • NP_001361749.1:p.Tyr1414Ter
  • NP_001361757.1:p.Tyr1454Ter
  • NP_059989.3:p.Tyr1401Ter
  • NP_065783.3:p.Tyr1331Ter
  • NC_000006.11:g.157517429T>A
Protein change:
Y1331*
Links:
dbSNP: rs1554234424
NCBI 1000 Genomes Browser:
rs1554234424
Molecular consequence:
  • NM_001363725.2:c.1863T>A - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001371656.1:c.4242T>A - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001374820.1:c.4242T>A - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001374828.1:c.4362T>A - nonsense - [Sequence Ontology: SO:0001587]
  • NM_017519.3:c.4203T>A - nonsense - [Sequence Ontology: SO:0001587]
  • NM_020732.3:c.3993T>A - nonsense - [Sequence Ontology: SO:0001587]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000741141Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Pathogenic
(Oct 21, 2015)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
African Americangermlineyes1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV000741141.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1African American1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Feb 20, 2024