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NM_152490.5(B3GALNT2):c.614T>C (p.Leu205Pro) AND Inborn genetic diseases

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Sep 29, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000622823.2

Allele description [Variation Report for NM_152490.5(B3GALNT2):c.614T>C (p.Leu205Pro)]

NM_152490.5(B3GALNT2):c.614T>C (p.Leu205Pro)

Gene:
B3GALNT2:beta-1,3-N-acetylgalactosaminyltransferase 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q42.3
Genomic location:
Preferred name:
NM_152490.5(B3GALNT2):c.614T>C (p.Leu205Pro)
HGVS:
  • NC_000001.11:g.235480091A>G
  • NG_033219.2:g.29391T>C
  • NM_001277155.3:c.737T>C
  • NM_152490.5:c.614T>CMANE SELECT
  • NP_001264084.1:p.Leu246Pro
  • NP_689703.1:p.Leu205Pro
  • NC_000001.10:g.235643407A>G
  • NM_152490.2:c.614T>C
Protein change:
L205P
Links:
dbSNP: rs1553349873
NCBI 1000 Genomes Browser:
rs1553349873
Molecular consequence:
  • NM_001277155.3:c.737T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_152490.5:c.614T>C - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000742987Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Uncertain significance
(Sep 29, 2017)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Hispanic/Mexicangermlineyes1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV000742987.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Hispanic/Mexican1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Mar 26, 2023