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NM_152558.5(IQCE):c.1333C>T (p.Arg445Ter) AND Inborn genetic diseases

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Nov 21, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000622504.2

Allele description [Variation Report for NM_152558.5(IQCE):c.1333C>T (p.Arg445Ter)]

NM_152558.5(IQCE):c.1333C>T (p.Arg445Ter)

Gene:
IQCE:IQ motif containing E [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7p22.3
Genomic location:
Preferred name:
NM_152558.5(IQCE):c.1333C>T (p.Arg445Ter)
HGVS:
  • NC_000007.14:g.2593110C>T
  • NM_001287499.2:c.1333C>T
  • NM_001287500.2:c.1285C>T
  • NM_001287501.2:c.1138C>T
  • NM_001287502.2:c.1138C>T
  • NM_152558.5:c.1333C>TMANE SELECT
  • NP_001274428.1:p.Arg445Ter
  • NP_001274429.1:p.Arg429Ter
  • NP_001274430.1:p.Arg380Ter
  • NP_001274431.1:p.Arg380Ter
  • NP_689771.3:p.Arg445Ter
  • NC_000007.13:g.2632744C>T
  • NM_152558.3:c.1333C>T
Protein change:
R380*
Links:
dbSNP: rs753670589
NCBI 1000 Genomes Browser:
rs753670589
Molecular consequence:
  • NM_001287499.2:c.1333C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001287500.2:c.1285C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001287501.2:c.1138C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001287502.2:c.1138C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_152558.5:c.1333C>T - nonsense - [Sequence Ontology: SO:0001587]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000743084Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Likely pathogenic
(Nov 21, 2017)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Afghanigermlineyes1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV000743084.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Afghani1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Jan 7, 2023