NM_001127222.2(CACNA1A):c.2737C>T (p.Pro913Ser) AND not provided

Clinical significance:Likely benign (Last evaluated: May 3, 2017)

Review status:1 star out of maximum of 4 stars

criteria provided, single submitter

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV000514339.4

Allele description [Variation Report for NM_001127222.2(CACNA1A):c.2737C>T (p.Pro913Ser)]

NM_001127222.2(CACNA1A):c.2737C>T (p.Pro913Ser)

Gene:
CACNA1A:calcium voltage-gated channel subunit alpha1 A [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.13
Genomic location:
Preferred name:
NM_001127222.2(CACNA1A):c.2737C>T (p.Pro913Ser)
HGVS:
  • NC_000019.10:g.13298896G>A
  • NG_011569.1:g.212565C>T
  • NM_000068.4:c.2749C>T
  • NM_001127221.2:c.2740C>T
  • NM_001127222.2:c.2737C>TMANE SELECT
  • NM_001174080.2:c.2740C>T
  • NM_023035.3:c.2749C>T
  • NP_000059.3:p.Pro917Ser
  • NP_001120693.1:p.Pro914Ser
  • NP_001120693.1:p.Pro914Ser
  • NP_001120694.1:p.Pro913Ser
  • NP_001167551.1:p.Pro914Ser
  • NP_075461.2:p.Pro917Ser
  • LRG_7t1:c.2740C>T
  • LRG_7:g.212565C>T
  • LRG_7p1:p.Pro914Ser
  • NC_000019.9:g.13409710G>A
  • NM_000068.2:c.2740C>T
  • NM_001127221.1:c.2740C>T
Protein change:
P913S
Links:
dbSNP: rs16020
NCBI 1000 Genomes Browser:
rs16020
Molecular consequence:
  • NM_000068.4:c.2749C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127221.2:c.2740C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127222.2:c.2737C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001174080.2:c.2740C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_023035.3:c.2749C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000610384Center for Pediatric Genomic Medicine,Children's Mercy Hospital and Clinicscriteria provided, single submitter
Likely benign
(May 3, 2017)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Center for Pediatric Genomic Medicine,Children's Mercy Hospital and Clinics, SCV000610384.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot provided0.002217not providednot provided

Last Updated: Dec 4, 2021

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