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GRCh37/hg19 8q22.1(chr8:93391781-96572606)x1 AND See cases

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Jul 14, 2015
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000512300.2

Allele description [Variation Report for GRCh37/hg19 8q22.1(chr8:93391781-96572606)x1]

GRCh37/hg19 8q22.1(chr8:93391781-96572606)x1

Genes:
  • CIBAR1:CBY1 interacting BAR domain containing 1 [Gene - OMIM - HGNC]
  • GEM:GTP binding protein overexpressed in skeletal muscle [Gene - OMIM - HGNC]
  • NDUFAF6:NADH:ubiquinone oxidoreductase complex assembly factor 6 [Gene - OMIM - HGNC]
  • RAD54B:RAD54 homolog B [Gene - OMIM - HGNC]
  • RBM12B:RNA binding motif protein 12B [Gene - HGNC]
  • CDH17:cadherin 17 [Gene - OMIM - HGNC]
  • CFAP418:cilia and flagella associated protein 418 [Gene - OMIM - HGNC]
  • CCNE2:cyclin E2 [Gene - OMIM - HGNC]
  • DPY19L4:dpy-19 like 4 [Gene - OMIM - HGNC]
  • ESRP1:epithelial splicing regulatory protein 1 [Gene - OMIM - HGNC]
  • FSBP:fibrinogen silencer binding protein [Gene - OMIM - HGNC]
  • INTS8:integrator complex subunit 8 [Gene - OMIM - HGNC]
  • LINC02906:long intergenic non-protein coding RNA 2906 [Gene - HGNC]
  • PLEKHF2:pleckstrin homology and FYVE domain containing 2 [Gene - OMIM - HGNC]
  • PDP1:pyruvate dehydrogenase phosphatase catalytic subunit 1 [Gene - OMIM - HGNC]
  • TMEM67:transmembrane protein 67 [Gene - OMIM - HGNC]
  • TRIQK:triple QxxK/R motif containing [Gene - HGNC]
  • TP53INP1:tumor protein p53 inducible nuclear protein 1 [Gene - OMIM - HGNC]
  • VIRMA:vir like m6A methyltransferase associated [Gene - OMIM - HGNC]
Variant type:
copy number loss
Cytogenetic location:
8q22.1
Genomic location:
Chr8: 93391781 - 96572606 (on Assembly GRCh37)
Preferred name:
GRCh37/hg19 8q22.1(chr8:93391781-96572606)x1
HGVS:
NC_000008.10:g.(?_93391781)_(96572606_?)del
Links:
dbVar: nssv13648767; dbVar: nsv2769577
Observations:
1

Condition(s)

Name:
See cases [See the Variation display for details]
Identifiers:

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000584448ISCA site 1

See additional submitters

no assertion criteria provided
Likely pathogenic
(Jul 14, 2015)
not providedclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providednot providedyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies.

Miller DT, Adam MP, Aradhya S, Biesecker LG, Brothman AR, Carter NP, Church DM, Crolla JA, Eichler EE, Epstein CJ, Faucett WA, Feuk L, Friedman JM, Hamosh A, Jackson L, Kaminsky EB, Kok K, Krantz ID, Kuhn RM, Lee C, Ostell JM, Rosenberg C, et al.

Am J Hum Genet. 2010 May 14;86(5):749-64. doi: 10.1016/j.ajhg.2010.04.006. Review.

PubMed [citation]
PMID:
20466091
PMCID:
PMC2869000

Details of each submission

From ISCA site 1, SCV000584448.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1not providedyesnot providednot providedDiscovery1not providednot providednot provided

Last Updated: Apr 23, 2022