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NM_181523.3(PIK3R1):c.1425+1G>C AND not specified

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jan 26, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000508456.8

Allele description [Variation Report for NM_181523.3(PIK3R1):c.1425+1G>C]

NM_181523.3(PIK3R1):c.1425+1G>C

Gene:
PIK3R1:phosphoinositide-3-kinase regulatory subunit 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
5q13.1
Genomic location:
Preferred name:
NM_181523.3(PIK3R1):c.1425+1G>C
HGVS:
  • NC_000005.10:g.68293835G>C
  • NG_012849.2:g.83080G>C
  • NM_001242466.2:c.336+1G>C
  • NM_181504.4:c.615+1G>C
  • NM_181523.3:c.1425+1G>CMANE SELECT
  • NM_181524.2:c.525+1G>C
  • LRG_453t1:c.1425+1G>C
  • LRG_453:g.83080G>C
  • NC_000005.9:g.67589663G>C
  • NM_181523.2:c.1425+1G>C
Note:
NCBI staff reviewed the sequence information reported in PubMed 25133428 Fig. 1D to determine the location of this allele on the current reference sequence.
Nucleotide change:
IVS11DS, G-C, +1
Links:
OMIM: 171833.0008; dbSNP: rs587777709
NCBI 1000 Genomes Browser:
rs587777709
Molecular consequence:
  • NM_001242466.2:c.336+1G>C - splice donor variant - [Sequence Ontology: SO:0001575]
  • NM_181504.4:c.615+1G>C - splice donor variant - [Sequence Ontology: SO:0001575]
  • NM_181523.3:c.1425+1G>C - splice donor variant - [Sequence Ontology: SO:0001575]
  • NM_181524.2:c.525+1G>C - splice donor variant - [Sequence Ontology: SO:0001575]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000604668ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories
criteria provided, single submitter

(ARUP Molecular Germline Variant Investigation Process)
Pathogenic
(Jan 26, 2017)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories, SCV000604668.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Feb 28, 2024