NM_000051.4(ATM):c.1695A>G (p.Glu565=) AND not provided

Clinical significance:Uncertain significance (Last evaluated: Nov 30, 2020)

Review status:1 star out of maximum of 4 stars

criteria provided, single submitter

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV000483767.3

Allele description [Variation Report for NM_000051.4(ATM):c.1695A>G (p.Glu565=)]

NM_000051.4(ATM):c.1695A>G (p.Glu565=)

Gene:
ATM:ATM serine/threonine kinase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11q22.3
Genomic location:
Preferred name:
NM_000051.4(ATM):c.1695A>G (p.Glu565=)
HGVS:
  • NC_000011.10:g.108251924A>G
  • NG_009830.1:g.34093A>G
  • NM_000051.4:c.1695A>GMANE SELECT
  • NM_001351834.2:c.1695A>G
  • NP_000042.3:p.Glu565=
  • NP_000042.3:p.Glu565=
  • NP_001338763.1:p.Glu565=
  • LRG_135t1:c.1695A>G
  • LRG_135:g.34093A>G
  • LRG_135p1:p.Glu565=
  • NC_000011.9:g.108122651A>G
  • NM_000051.3:c.1695A>G
Links:
dbSNP: rs780932013
NCBI 1000 Genomes Browser:
rs780932013
Molecular consequence:
  • NM_000051.4:c.1695A>G - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001351834.2:c.1695A>G - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000567907GeneDxcriteria provided, single submitter
Uncertain significance
(Nov 30, 2020)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000567907.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

Not observed at a significant frequency in large population cohorts (Lek et al., 2016); In silico analysis supports a deleterious effect on splicing; Has not been previously published as pathogenic or benign to our knowledge

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 4, 2021

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