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NM_000335.5(SCN5A):c.4168G>A (p.Gly1390Arg) AND Brugada syndrome

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Aug 14, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000471648.14

Allele description [Variation Report for NM_000335.5(SCN5A):c.4168G>A (p.Gly1390Arg)]

NM_000335.5(SCN5A):c.4168G>A (p.Gly1390Arg)

Gene:
SCN5A:sodium voltage-gated channel alpha subunit 5 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p22.2
Genomic location:
Preferred name:
NM_000335.5(SCN5A):c.4168G>A (p.Gly1390Arg)
Other names:
p.G1391R:GGA>AGA
HGVS:
  • NC_000003.12:g.38560221C>T
  • NG_008934.1:g.94452G>A
  • NM_000335.5:c.4168G>AMANE SELECT
  • NM_001099404.1:c.4171G>A
  • NM_001099404.2:c.4171G>A
  • NM_001099405.2:c.4171G>A
  • NM_001160160.2:c.4168G>A
  • NM_001160161.2:c.4009G>A
  • NM_001354701.2:c.4168G>A
  • NM_198056.3:c.4171G>A
  • NP_000326.2:p.Gly1390Arg
  • NP_001092874.1:p.Gly1391Arg
  • NP_001092875.1:p.Gly1391Arg
  • NP_001153632.1:p.Gly1390Arg
  • NP_001153633.1:p.Gly1337Arg
  • NP_001341630.1:p.Gly1390Arg
  • NP_932173.1:p.Gly1391Arg
  • NP_932173.1:p.Gly1391Arg
  • LRG_289t1:c.4171G>A
  • LRG_289t3:c.4171G>A
  • LRG_289:g.94452G>A
  • LRG_289p1:p.Gly1391Arg
  • NC_000003.11:g.38601712C>T
  • NM_198056.2:c.4171G>A
  • NM_198056.3:c.4171G>A
Protein change:
G1337R
Links:
dbSNP: rs780405533
NCBI 1000 Genomes Browser:
rs780405533
Molecular consequence:
  • NM_000335.5:c.4168G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001099404.2:c.4171G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001099405.2:c.4171G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001160160.2:c.4168G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001160161.2:c.4009G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354701.2:c.4168G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_198056.3:c.4171G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Brugada syndrome
Synonyms:
Sudden unexpected nocturnal death syndrome; Sudden unexplained nocturnal death syndrome; Sudden Unexplained Death Syndrome; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0015263; MedGen: C1142166; OMIM: PS601144

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001338821Molecular Genetics Laboratory, BC Children's and BC Women's Hospitals
no assertion criteria provided

(ACMG Guidelines, 2015)
Uncertain significance
(Aug 14, 2019)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Molecular Genetics Laboratory, BC Children's and BC Women's Hospitals, SCV001338821.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 20, 2024