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NM_002168.4(IDH2):c.419G>A (p.Arg140Gln) AND Acute myeloid leukemia

Germline classification:
Pathogenic (1 submission)
Last evaluated:
May 31, 2016
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000419192.1

Allele description

NM_002168.4(IDH2):c.419G>A (p.Arg140Gln)

Gene:
IDH2:isocitrate dehydrogenase (NADP(+)) 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
15q26.1
Genomic location:
Preferred name:
NM_002168.4(IDH2):c.419G>A (p.Arg140Gln)
HGVS:
  • NC_000015.10:g.90088702C>T
  • NG_023302.1:g.18775G>A
  • NM_001289910.1:c.263G>A
  • NM_001290114.2:c.29G>A
  • NM_002168.4:c.419G>AMANE SELECT
  • NP_001276839.1:p.Arg88Gln
  • NP_001277043.1:p.Arg10Gln
  • NP_002159.2:p.Arg140Gln
  • NP_002159.2:p.Arg140Gln
  • LRG_611t1:c.263G>A
  • LRG_611t2:c.419G>A
  • LRG_611:g.18775G>A
  • LRG_611p1:p.Arg88Gln
  • LRG_611p2:p.Arg140Gln
  • NC_000015.9:g.90631934C>T
  • NM_002168.2:c.419G>A
  • NM_002168.3:c.419G>A
  • P48735:p.Arg140Gln
Protein change:
R10Q; ARG140GLN
Links:
UniProtKB: P48735#VAR_065175; OMIM: 147650.0001; dbSNP: rs121913502
NCBI 1000 Genomes Browser:
rs121913502
Molecular consequence:
  • NM_001289910.1:c.263G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001290114.2:c.29G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_002168.4:c.419G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Acute myeloid leukemia (AML)
Synonyms:
Acute myeloid leukemia, adult; AML adult; Acute myelogenous leukemia; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0018874; MeSH: D015470; MedGen: C0023467; Orphanet: 519; OMIM: 601626; Human Phenotype Ontology: HP:0004808

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000504572Database of Curated Mutations (DoCM)
no assertion criteria provided
Pathogenic
(May 31, 2016)
somaticliterature only

PubMed (9)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedsomaticyesnot providednot providednot providednot providednot providedliterature only

Citations

PubMed

[Mutation of isocitrate dehydrogenase 2 (IDH2) gene in Chinese AML patients and its clinical significance].

Shang Z, Wang D, Xiao M, Wang J, Li TJ, Zhao YC, Li CR, Zhou JF.

Zhongguo Shi Yan Xue Ye Xue Za Zhi. 2013 Jun;21(3):607-12. doi: 10.7534/j.issn.1009-2137.2013.03.014. Chinese.

PubMed [citation]
PMID:
23815907

Molecular alterations of isocitrate dehydrogenase 1 and 2 (IDH1 and IDH2) metabolic genes and additional genetic mutations in newly diagnosed acute myeloid leukemia patients.

Chotirat S, Thongnoppakhun W, Promsuwicha O, Boonthimat C, Auewarakul CU.

J Hematol Oncol. 2012 Mar 7;5:5. doi: 10.1186/1756-8722-5-5.

PubMed [citation]
PMID:
22397365
PMCID:
PMC3320529
See all PubMed Citations (9)

Details of each submission

From Database of Curated Mutations (DoCM), SCV000504572.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (9)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1somaticyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jun 15, 2022