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NM_000261.2(MYOC):c.1102C>T (p.Gln368Ter) AND Primary open angle glaucoma

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Jun 14, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000369379.7

Allele description [Variation Report for NM_000261.2(MYOC):c.1102C>T (p.Gln368Ter)]

NM_000261.2(MYOC):c.1102C>T (p.Gln368Ter)

Gene:
MYOC:myocilin [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q24.3
Genomic location:
Preferred name:
NM_000261.2(MYOC):c.1102C>T (p.Gln368Ter)
Other names:
NM_000261.2(MYOC):c.1102C>T; p.Gln368Ter
HGVS:
  • NC_000001.11:g.171636338G>A
  • NG_008859.1:g.21296C>T
  • NM_000261.2:c.1102C>TMANE SELECT
  • NP_000252.1:p.Gln368Ter
  • NC_000001.10:g.171605478G>A
  • NC_000001.10:g.171605478G>A
  • NM_000261.1:c.1102C>T
Protein change:
Q368*; GLN368TER
Links:
OMIM: 601652.0003; dbSNP: rs74315329
NCBI 1000 Genomes Browser:
rs74315329
Molecular consequence:
  • NM_000261.2:c.1102C>T - nonsense - [Sequence Ontology: SO:0001587]

Condition(s)

Name:
Primary open angle glaucoma (POAG)
Synonyms:
OPTN-related open angle glaucoma
Identifiers:
MONDO: MONDO:0100553; MedGen: C0339573; OMIM: 137760

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000351279Illumina Laboratory Services, Illumina
criteria provided, single submitter

(ICSL Variant Classification 20161018)
Likely pathogenic
(Jun 14, 2016)
germlineclinical testing

PubMed (15)
[See all records that cite these PMIDs]

ICSL_Variant_Classification_20161018.pdf

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Identification of a gene that causes primary open angle glaucoma.

Stone EM, Fingert JH, Alward WL, Nguyen TD, Polansky JR, Sunden SL, Nishimura D, Clark AF, Nystuen A, Nichols BE, Mackey DA, Ritch R, Kalenak JW, Craven ER, Sheffield VC.

Science. 1997 Jan 31;275(5300):668-70.

PubMed [citation]
PMID:
9005853

A novel mutation in the GLC1A gene causes juvenile open-angle glaucoma in 4 families from the Italian region of Puglia.

Angius A, De Gioia E, Loi A, Fossarello M, Sole G, Orzalesi N, Grignolo F, Cao A, Pirastu M.

Arch Ophthalmol. 1998 Jun;116(6):793-7.

PubMed [citation]
PMID:
9639450
See all PubMed Citations (15)

Details of each submission

From Illumina Laboratory Services, Illumina, SCV000351279.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (15)

Description

The c.1102C>T (p.Gln368Ter) variant is a stop-gained variant. Across a selection of the available literature, the p.Gln368Ter variant has been identified in a heterozygous state in 107 patients affected with primary open angle glaucoma (POAG) or ocular hypertension (Stone et al. 1997; Angius et al. 2000; Craig et al. 2001; Mataftsi et al. 2001; Cobb et al. 2002; Faucher et al. 2002; Melki et al. 2003; Bhattacharjee et al. 2007; Lopez-Martinez et al. 2007; Hogewind et al. 2010; Liu et al. 2012; Young et al. 2012). The p.Gln368Ter variant was also reported in a heterozygous state in 56 controls and unaffected family members and is reported at a frequency of 0.00363 in the European (Finnish) population of the Exome Aggregation Consortium. The relatively high number of unaffected individuals carrying the variant could be consistent with reduced or age-related penetrance. This variant may represent a risk allele for development of POAG. In vitro functional studies by Aroca-Aquilar et al. (2008) showed that heterozygous expression of the p.Gln368Ter variant increases secretion of the variant protein and reduces extracellular processed myocilin, while Qiu et al. (2014) demonstrated that p.Gln368Ter variant myocilin results in compromised ubiquitin-proteasome function and induced autophagy. Based on the evidence, the p.Gln368Ter variant is classified as likely pathogenic and possible risk allele for primary open angle glaucoma.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jan 19, 2025