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NM_022162.2(NOD2):c.241C>G (p.Leu81Val) AND Behcet disease

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Oct 1, 2016
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000258045.8

Allele description [Variation Report for NM_022162.2(NOD2):c.241C>G (p.Leu81Val)]

NM_022162.2(NOD2):c.241C>G (p.Leu81Val)

Gene:
NOD2:nucleotide binding oligomerization domain containing 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
16q12.1
Genomic location:
Preferred name:
NM_022162.2(NOD2):c.241C>G (p.Leu81Val)
Other names:
NOD2
HGVS:
  • NC_000016.10:g.50699655C>G
  • NG_007508.1:g.7517C>G
  • NM_001293557.2:c.160C>G
  • NM_001370466.1:c.160C>GMANE SELECT
  • NM_022162.3:c.241C>G
  • NP_001280486.1:p.Leu54Val
  • NP_001357395.1:p.Leu54Val
  • NP_071445.1:p.Leu81Val
  • LRG_177:g.7517C>G
  • NC_000016.9:g.50733566C>G
  • NM_022162.2:c.241C>G
  • NR_163434.1:n.225C>G
Protein change:
L54V
Links:
dbSNP: rs34936594
NCBI 1000 Genomes Browser:
rs34936594
Molecular consequence:
  • NM_001293557.2:c.160C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001370466.1:c.160C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_022162.3:c.241C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NR_163434.1:n.225C>G - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Behcet disease (BD)
Synonyms:
Behcet's disease; Behcet's syndrome; Behcet Syndrome
Identifiers:
MONDO: MONDO:0007191; MedGen: C0004943; Orphanet: 117; OMIM: 109650

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000323135Department of Immunology, Hospital Universitario Virgen del Rocio
no assertion criteria provided
Pathogenic
(Oct 1, 2016)
germlinecase-control

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Caucasiangermlineyes1not providednot providednot providednot providedcase-control

Details of each submission

From Department of Immunology, Hospital Universitario Virgen del Rocio, SCV000323135.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Caucasian1not providednot providedcase-controlnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Apr 15, 2024