NM_007327.4(GRIN1):c.1331C>T (p.Pro444Leu) AND not provided

Clinical significance:Benign (Last evaluated: Feb 26, 2020)

Review status:1 star out of maximum of 4 stars

criteria provided, single submitter

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV000255622.4

Allele description [Variation Report for NM_007327.4(GRIN1):c.1331C>T (p.Pro444Leu)]

NM_007327.4(GRIN1):c.1331C>T (p.Pro444Leu)

Gene:
GRIN1:glutamate ionotropic receptor NMDA type subunit 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9q34.3
Genomic location:
Preferred name:
NM_007327.4(GRIN1):c.1331C>T (p.Pro444Leu)
HGVS:
  • NC_000009.12:g.137161189C>T
  • NG_011507.1:g.27033C>T
  • NM_000832.7:c.1331C>T
  • NM_001185090.2:c.1394C>T
  • NM_001185091.2:c.1394C>T
  • NM_007327.4:c.1331C>TMANE SELECT
  • NM_021569.4:c.1331C>T
  • NP_000823.4:p.Pro444Leu
  • NP_001172019.1:p.Pro465Leu
  • NP_001172020.1:p.Pro465Leu
  • NP_015566.1:p.Pro444Leu
  • NP_067544.1:p.Pro444Leu
  • NC_000009.11:g.140055641C>T
  • NM_007327.3:c.1331C>T
Protein change:
P444L
Links:
dbSNP: rs200225692
NCBI 1000 Genomes Browser:
rs200225692
Molecular consequence:
  • NM_000832.7:c.1331C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001185090.2:c.1394C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001185091.2:c.1394C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_007327.4:c.1331C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_021569.4:c.1331C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000321755GeneDxcriteria provided, single submitter
Benign
(Feb 26, 2020)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000321755.7

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; Has not been previously published as pathogenic or benign to our knowledge

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 26, 2021

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