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NM_000551.4(VHL):c.479A>T (p.Glu160Val) AND Pheochromocytoma

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Dec 1, 2015
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000203510.1

Allele description [Variation Report for NM_000551.4(VHL):c.479A>T (p.Glu160Val)]

NM_000551.4(VHL):c.479A>T (p.Glu160Val)

Genes:
LOC107303340:3p25 von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase Alu-mediated recombination region [Gene]
VHL:von Hippel-Lindau tumor suppressor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p25.3
Genomic location:
Preferred name:
NM_000551.4(VHL):c.479A>T (p.Glu160Val)
HGVS:
  • NC_000003.12:g.10149802A>T
  • NG_008212.3:g.13168A>T
  • NG_046756.1:g.7564A>T
  • NM_000551.4:c.479A>TMANE SELECT
  • NM_001354723.2:c.*33A>T
  • NM_198156.3:c.356A>T
  • NP_000542.1:p.Glu160Val
  • NP_000542.1:p.Glu160Val
  • NP_937799.1:p.Glu119Val
  • LRG_322t1:c.479A>T
  • LRG_322:g.13168A>T
  • LRG_322p1:p.Glu160Val
  • NC_000003.11:g.10191486A>T
  • NM_000551.3:c.479A>T
Protein change:
E119V
Links:
dbSNP: rs864321641
NCBI 1000 Genomes Browser:
rs864321641
Molecular consequence:
  • NM_001354723.2:c.*33A>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_000551.4:c.479A>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_198156.3:c.356A>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Pheochromocytoma
Synonyms:
Chromaffinoma; Chromaffin paraganglioma; Chromaffin tumor; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0008233; MedGen: C0031511; Orphanet: 29072; OMIM: 171300; Human Phenotype Ontology: HP:0002666

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000258640Endocrinology Clinic, Seth G.S. Medical College - Spectrum of Germline Mutations in Indian Patients with Pheochromocytoma/ Paraganglioma (PHEO/PGL)
no assertion criteria provided
Likely pathogenic
(Dec 1, 2015)
germlineresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Endocrinology Clinic, Seth G.S. Medical College - Spectrum of Germline Mutations in Indian Patients with Pheochromocytoma/ Paraganglioma (PHEO/PGL), SCV000258640.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 17, 2022