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NM_001365088.1(SLC12A6):c.271+17825C>T AND not specified

Germline classification:
Uncertain significance (2 submissions)
Last evaluated:
Feb 13, 2015
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000202720.3

Allele description [Variation Report for NM_001365088.1(SLC12A6):c.271+17825C>T]

NM_001365088.1(SLC12A6):c.271+17825C>T

Gene:
SLC12A6:solute carrier family 12 member 6 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
15q14
Genomic location:
Preferred name:
NM_001365088.1(SLC12A6):c.271+17825C>T
HGVS:
  • NC_000015.10:g.34318585G>A
  • NG_007951.1:g.24480C>T
  • NM_001042494.2:c.94+17825C>T
  • NM_001042495.2:c.94+17825C>T
  • NM_001042496.2:c.244+17825C>T
  • NM_001042497.2:c.271+17825C>T
  • NM_001365088.1:c.271+17825C>TMANE SELECT
  • NM_005135.2:c.94C>T
  • NM_133647.2:c.271+17825C>T
  • NP_005126.1:p.Arg32Trp
  • LRG_270t1:c.94C>T
  • LRG_270:g.24480C>T
  • LRG_270p1:p.Arg32Trp
  • NC_000015.9:g.34610786G>A
Protein change:
R32W
Links:
dbSNP: rs150751809
NCBI 1000 Genomes Browser:
rs150751809
Molecular consequence:
  • NM_001042494.2:c.94+17825C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001042495.2:c.94+17825C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001042496.2:c.244+17825C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001042497.2:c.271+17825C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001365088.1:c.271+17825C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_133647.2:c.271+17825C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_005135.2:c.94C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000258015Genomic Diagnostic Laboratory, Division of Genomic Diagnostics, Children's Hospital of Philadelphia
criteria provided, single submitter

(DGD Variant Analysis Guidelines)
Uncertain significance
(Feb 13, 2015)
unknownclinical testing

DGD_Variant_Analysis_Guidelines.docx,

Citation Link,

SCV001972322Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus

See additional submitters

no assertion criteria provided
Benigngermlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Genomic Diagnostic Laboratory, Division of Genomic Diagnostics, Children's Hospital of Philadelphia, SCV000258015.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

From Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus, SCV001972322.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 8, 2024