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NM_003242.6(TGFBR2):c.985G>A (p.Ala329Thr) AND not specified

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Aug 19, 2014
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000198010.1

Allele description

NM_003242.6(TGFBR2):c.985G>A (p.Ala329Thr)

Gene:
TGFBR2:transforming growth factor beta receptor 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p24.1
Genomic location:
Preferred name:
NM_003242.6(TGFBR2):c.985G>A (p.Ala329Thr)
Other names:
p.A329T:GCC>ACC
HGVS:
  • NC_000003.12:g.30672168G>A
  • NG_007490.1:g.70667G>A
  • NM_001024847.2:c.1060G>A
  • NM_003242.6:c.985G>AMANE SELECT
  • NP_001020018.1:p.Ala354Thr
  • NP_003233.4:p.Ala329Thr
  • LRG_779t1:c.1060G>A
  • LRG_779t2:c.985G>A
  • LRG_779:g.70667G>A
  • LRG_779p1:p.Ala354Thr
  • LRG_779p2:p.Ala329Thr
  • NC_000003.11:g.30713660G>A
  • NM_003242.5:c.985G>A
Protein change:
A329T
Links:
dbSNP: rs148665451
NCBI 1000 Genomes Browser:
rs148665451
Molecular consequence:
  • NM_001024847.2:c.1060G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_003242.6:c.985G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000250928GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Uncertain significance
(Aug 19, 2014)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000250928.10

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

p.Ala329Thr (GCC>ACC): c.985 G>A in exon 4 of the TGFBR2 gene (NM_003242.5)Mutations in the TGFBR2 gene have been reported association with Loeys Dietz syndrome and also have been reported in approximately 4% of patients with familial TAAD (Milewicz D et al., 2012).The A329T variant in the TGFBR2 gene has been reported previously in individuals with the clinical diagnosis of Loeys Dietz syndrome (Loeys et al., 2006; Barnett et al., 2011). The A329T variant is a non-conservative amino acid substitution, which is likely to impact secondary protein structure as these residues differ in polarity, charge, size and/or other properties. This substitution occurs at a position that is not conserved across species. Mutations in nearby residues (T325P, Y336N) have been reported in association with TGFRB2-related phenotype, further supporting the functional importance of this region of the protein. Furthermore, the A329T mutation was not observed inapproximately 6,500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. However, in silico analysis is inconsistent in its predictions as to whether or not the variant is damaging to the protein structure/function.Therefore, based on the currently available information, it is unclear whether this variant is a pathogenic mutation or a rare benign variant. This variant was found in TAAD

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jun 8, 2021