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NM_001134363.3(RBM20):c.2158A>G (p.Lys720Glu) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Apr 23, 2014
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000183871.1

Allele description [Variation Report for NM_001134363.3(RBM20):c.2158A>G (p.Lys720Glu)]

NM_001134363.3(RBM20):c.2158A>G (p.Lys720Glu)

Gene:
RBM20:RNA binding motif protein 20 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
10q25.2
Genomic location:
Preferred name:
NM_001134363.3(RBM20):c.2158A>G (p.Lys720Glu)
Other names:
p.K720E:AAG>GAG
HGVS:
  • NC_000010.11:g.110812555A>G
  • NG_021177.1:g.173159A>G
  • NM_001134363.3:c.2158A>GMANE SELECT
  • NP_001127835.2:p.Lys720Glu
  • LRG_382t1:c.2158A>G
  • LRG_382:g.173159A>G
  • NC_000010.10:g.112572313A>G
  • NM_001134363.1:c.2158A>G
Protein change:
K720E
Links:
dbSNP: rs794729151
NCBI 1000 Genomes Browser:
rs794729151
Molecular consequence:
  • NM_001134363.3:c.2158A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000236353GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Uncertain significance
(Apr 23, 2014)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000236353.10

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

p.Lys720Glu (AAG>GAG): c.2158 A>G in exon 9 of the RBM20 gene (NM_001134363.1). The K720E variant has not been published as a mutation, nor has it been reported as a benign polymorphism to our knowledge. The K720E variant was not observed in approximately 2,300 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. The K720E variant is a non-conservative amino acid substitution, which is likely to impact secondary protein structure as these residues differ in polarity, charge, size and/or other properties. This substitution occurs at a position that is conserved across species. In silico analysis is inconsistent in its predictions as to whether or not the variant is damaging to the protein structure/function. A missense mutation in a nearby residue (R716Q) have been reported in association with cardiomyopathy, supporting the functional importance of this region of the protein. Therefore, based on the currently available information, it is unclear whether this variant is a pathogenic mutation or a rare benign variant. The variant is found in CARDIOMYOPATHY panel(s).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 5, 2022