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NM_007171.3(POMT1):c.42C>T (p.Asp14=) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Apr 1, 2015
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000175834.1

Allele description

NM_007171.3(POMT1):c.42C>T (p.Asp14=)

Gene:
POMT1:protein O-mannosyltransferase 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9q34.13
Genomic location:
Preferred name:
NM_007171.3(POMT1):c.42C>T (p.Asp14=)
HGVS:
  • NC_000009.12:g.131504260C>T
  • NG_008896.1:g.6359C>T
  • NM_001077366.1:c.-41+1187C>T
  • NM_007171.3:c.42C>T
  • NP_009102.3:p.Asp14=
  • NC_000009.11:g.134379647C>T
  • p.Asp14Asp
Links:
dbSNP: rs150937126
GMAF:
0.0002(T), 150937126
NCBI 1000 Genomes Browser:
rs150937126
Molecular consequence:
  • NM_001077366.1:c.-41+1187C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_007171.3:c.42C>T - synonymous variant - [Sequence Ontology: SO:0001819]
Observations:
1

Condition(s)

Identifiers:
MedGen: CN221809

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000227398Emory Genetics Laboratory,Emory University
criteria provided, single submitter

(EGL Classification Definitions)
Uncertain significance
(Apr 1, 2015)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot providednot providednot providedclinical testing

Details of each submission

From Emory Genetics Laboratory,Emory University, SCV000227398.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided1not providednot providednot provided

Last Updated: Nov 26, 2016