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NM_000162.5(GCK):c.118G>A (p.Glu40Lys) AND not provided

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Nov 22, 2014
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000175536.4

Allele description [Variation Report for NM_000162.5(GCK):c.118G>A (p.Glu40Lys)]

NM_000162.5(GCK):c.118G>A (p.Glu40Lys)

Gene:
GCK:glucokinase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7p13
Genomic location:
Preferred name:
NM_000162.5(GCK):c.118G>A (p.Glu40Lys)
HGVS:
  • NC_000007.14:g.44153391C>T
  • NG_008847.2:g.49780G>A
  • NM_000162.5:c.118G>AMANE SELECT
  • NM_001354800.1:c.118G>A
  • NM_033507.3:c.121G>A
  • NM_033508.3:c.115G>A
  • NP_000153.1:p.Glu40Lys
  • NP_001341729.1:p.Glu40Lys
  • NP_277042.1:p.Glu41Lys
  • NP_277043.1:p.Glu39Lys
  • LRG_1074t1:c.118G>A
  • LRG_1074t2:c.121G>A
  • LRG_1074:g.49780G>A
  • LRG_1074p1:p.Glu40Lys
  • LRG_1074p2:p.Glu41Lys
  • NC_000007.13:g.44192990C>T
Protein change:
E39K
Links:
dbSNP: rs794727236
NCBI 1000 Genomes Browser:
rs794727236
Molecular consequence:
  • NM_000162.5:c.118G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354800.1:c.118G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_033507.3:c.121G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_033508.3:c.115G>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
2

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000227038Eurofins Ntd Llc (ga)
criteria provided, single submitter

(EGL Classification Definitions 2015)
Pathogenic
(Nov 22, 2014)
germlineclinical testing

PubMed (2)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown2not providednot providednot providednot providedclinical testing

Citations

PubMed

Genetic epidemiology of MODY in the Czech republic: new mutations in the MODY genes HNF-4alpha, GCK and HNF-1alpha.

Pruhova S, Ek J, Lebl J, Sumnik Z, Saudek F, Andel M, Pedersen O, Hansen T.

Diabetologia. 2003 Feb;46(2):291-5. Epub 2003 Jan 8.

PubMed [citation]
PMID:
12627330

Ancestral mutations may cause a significant proportion of GCK-MODY.

Dusatkova P, Pruhova S, Borowiec M, Vesela K, Antosik K, Lebl J, Mlynarski W, Cinek O.

Pediatr Diabetes. 2012 Sep;13(6):489-98. doi: 10.1111/j.1399-5448.2011.00845.x. Epub 2012 Feb 15.

PubMed [citation]
PMID:
22332836

Details of each submission

From Eurofins Ntd Llc (ga), SCV000227038.5

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided2not providednot providedclinical testing PubMed (2)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided2not providednot providednot provided

Last Updated: Nov 4, 2023